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<?php
/**
* Clinical Decision Rules(CDR) engine functions.
*
* @package OpenEMR
* @link https://www.open-emr.org
* @author Brady Miller <brady.g.miller@gmail.com>
* @author Medical Information Integration, LLC
* @author Ensofttek, LLC
* @copyright Copyright (c) 2010-2019 Brady Miller <brady.g.miller@gmail.com>
* @copyright Copyright (c) 2011 Medical Information Integration, LLC
* @copyright Copyright (c) 2011 Ensofttek, LLC
* @license https://github.com/openemr/openemr/blob/master/LICENSE GNU General Public License 3
*/
require_once(dirname(__FILE__) . "/patient.inc");
require_once(dirname(__FILE__) . "/forms.inc");
require_once(dirname(__FILE__) . "/options.inc.php");
require_once(dirname(__FILE__) . "/report_database.inc");
use OpenEMR\Common\Acl\AclMain;
use OpenEMR\ClinicialDecisionRules\AMC\CertificationReportTypes;
use OpenEMR\Common\Logging\SystemLogger;
use OpenEMR\Services\FacilityService;
/**
* Return listing of CDR reminders in log.
*
* @param string $begin_date begin date (optional)
* @param string $end_date end date (optional)
* @return sqlret sql return query
*/
function listingCDRReminderLog($begin_date = '', $end_date = '')
{
if (empty($end_date)) {
$end_date = date('Y-m-d H:i:s');
}
$sqlArray = array();
$sql = "SELECT `date`, `pid`, `uid`, `category`, `value`, `new_value` FROM `clinical_rules_log` WHERE `date` <= ?";
$sqlArray[] = $end_date;
if (!empty($begin_date)) {
$sql .= " AND `date` >= ?";
$sqlArray[] = $begin_date;
}
$sql .= " ORDER BY `date` DESC";
return sqlStatement($sql, $sqlArray);
}
/**
* Display the clinical summary widget.
*
* @param integer $patient_id pid of selected patient
* @param string $mode choose either 'reminders-all' or 'reminders-due' (required)
* @param string $dateTarget target date (format Y-m-d H:i:s). If blank then will test with current date as target.
* @param string $organize_mode Way to organize the results (default or plans)
* @param string $user If a user is set, then will only show rules that user has permission to see.
*/
function clinical_summary_widget($patient_id, $mode, $dateTarget = '', $organize_mode = 'default', $user = '')
{
// Set date to current if not set
$dateTarget = ($dateTarget) ? $dateTarget : date('Y-m-d H:i:s');
// Collect active actions
$actions = test_rules_clinic('', 'passive_alert', $dateTarget, $mode, $patient_id, '', $organize_mode, array(), 'primary', null, null, $user);
// Display the actions
$current_targets = array();
echo "<div class=\"list-group list-group-flush\">";
foreach ($actions as $action) {
// Deal with plan names first
if (isset($action['is_plan']) && $action['is_plan']) {
echo "<br /><b>";
echo xlt("Plan") . ": ";
echo generate_display_field(array('data_type' => '1','list_id' => 'clinical_plans'), $action['id']);
echo "</b><br />";
continue;
}
echo "<div class=\"list-group-item p-1 d-flex w-100 justify-content-between\">";
// Collect the Rule Title, Bibliographical citation, Rule Developer, Rule Funding Source, and Rule Release and show it when hover over the item.
// Show the link for Linked referential CDS (this is set via codetype:code)
$tooltip = '';
if (!empty($action['rule_id'])) {
$rule_title = getListItemTitle("clinical_rules", $action['rule_id']);
$ruleData = sqlQuery("SELECT `bibliographic_citation`, `developer`, `funding_source`, `release_version`, `web_reference`, `linked_referential_cds` " .
"FROM `clinical_rules` " .
"WHERE `id`=? AND `pid`=0", array($action['rule_id']));
$bibliographic_citation = $ruleData['bibliographic_citation'];
$developer = $ruleData['developer'];
$funding_source = $ruleData['funding_source'];
$release = $ruleData['release_version'];
$web_reference = $ruleData['web_reference'];
$linked_referential_cds = $ruleData['linked_referential_cds'];
if (!empty($rule_title)) {
$tooltip = xla('Rule Title') . ": " . attr($rule_title) . "&#013;";
}
if (!empty($bibliographic_citation)) {
$tooltip .= xla('Rule Bibliographic Citation') . ": " . attr($bibliographic_citation) . "&#013;";
}
if (!empty($developer)) {
$tooltip .= xla('Rule Developer') . ": " . attr($developer) . "&#013;";
}
if (!empty($funding_source)) {
$tooltip .= xla('Rule Funding Source') . ": " . attr($funding_source) . "&#013;";
}
if (!empty($release)) {
$tooltip .= xla('Rule Release') . ": " . attr($release);
}
if ((!empty($tooltip)) || (!empty($web_reference))) {
if (!empty($web_reference)) {
$tooltip = "<a href='" . attr($web_reference) . "' rel='noopener' target='_blank' style='white-space: pre-line;' title='" . $tooltip . "'><i class='fas fa-question-circle'></i></a>";
} else {
$tooltip = "<span style='white-space: pre-line;' title='" . $tooltip . "'><i class='fas fa-question-circle'></i></span>";
}
}
if (!empty($linked_referential_cds)) {
$codeParse = explode(":", $linked_referential_cds);
$codetype = $codeParse[0] ?? null;
$code = $codeParse[1] ?? null;
if (!empty($codetype) && !empty($code)) {
$tooltip .= "<a href='' title='" . xla('Link to Referential CDS') . "' onclick='referentialCdsClick(" . attr_js($codetype) . ", " . attr_js($code) . ")'><i class='fas fa-external-link-square-alt'></i></a>";
}
}
}
if ($action['custom_flag']) {
// Start link for reminders that use the custom rules input screen
$url = "../rules/patient_data.php?category=" . attr_url($action['category']);
$url .= "&item=" . attr_url($action['item']);
echo "<a href='" . $url . "' class='medium_modal' onclick='return top.restoreSession()'>";
} elseif ($action['clin_rem_link']) {
// Start link for reminders that use the custom rules input screen
$pieces_url = parse_url($action['clin_rem_link']);
$url_prefix = $pieces_url['scheme'];
if ($url_prefix == 'https' || $url_prefix == 'http') {
echo "<a href='" . $action['clin_rem_link'] .
"' class='medium_modal' onclick='return top.restoreSession()'>";
} else {
echo "<a href='../../../" . $action['clin_rem_link'] .
"' class='medium_modal' onclick='return top.restoreSession()'>";
}
} else {
// continue since no link is needed
}
// Display Reminder Details
echo generate_display_field(array('data_type' => '1','list_id' => 'rule_action_category'), $action['category']) .
": " . generate_display_field(array('data_type' => '1','list_id' => 'rule_action'), $action['item']);
if ($action['custom_flag'] || $action['clin_rem_link']) {
// End link for reminders that use an html link
echo "</a>";
}
// Display due status
if ($action['due_status']) {
// Color code the status (red for past due, purple for due, green for not due and black for soon due)
if ($action['due_status'] == "past_due") {
echo "<span class='text-danger'>";
} elseif ($action['due_status'] == "due") {
echo "<span class='text-warning'>";
} elseif ($action['due_status'] == "not_due") {
echo "<span class='text-success>";
} else {
echo "<span>";
}
echo generate_display_field(array('data_type' => '1','list_id' => 'rule_reminder_due_opt'), $action['due_status']);
}
// Display the tooltip
if (!empty($tooltip)) {
echo "&nbsp;{$tooltip}";
}
echo "</span>";
// Add the target(and rule id and room for future elements as needed) to the $current_targets array.
// Only when $mode is reminders-due
if ($mode == "reminders-due" && $GLOBALS['enable_alert_log']) {
$target_temp = $action['category'] . ":" . $action['item'];
$current_targets[$target_temp] = array('rule_id' => $action['rule_id'],'due_status' => $action['due_status']);
}
echo "</div>";
}
echo "</div>";
// Compare the current with most recent action log (this function will also log the current actions)
// Only when $mode is reminders-due
if ($mode == "reminders-due" && $GLOBALS['enable_alert_log']) {
$new_targets = compare_log_alerts($patient_id, $current_targets, 'clinical_reminder_widget', $_SESSION['authUserID']);
if (!empty($new_targets) && $GLOBALS['enable_cdr_new_crp']) {
// If there are new action(s), then throw a popup (if the enable_cdr_new_crp global is turned on)
// Note I am taking advantage of a slight hack in order to run javascript within code that
// is being passed via an ajax call by using a dummy image.
echo '<img src="../../pic/empty.gif" onload="alert(\'' . xls('New Due Clinical Reminders') . '\n\n';
foreach ($new_targets as $key => $value) {
$category_item = explode(":", $key);
$category = $category_item[0];
$item = $category_item[1];
echo generate_display_field(array('data_type' => '1','list_id' => 'rule_action_category'), $category) .
': ' . generate_display_field(array('data_type' => '1','list_id' => 'rule_action'), $item) . '\n';
}
echo '\n' . '(' . xls('See the Clinical Reminders widget for more details') . ')';
echo '\');this.parentNode.removeChild(this);" />';
}
}
}
/**
* Display the active screen reminder.
*
* @param integer $patient_id pid of selected patient
* @param string $mode choose either 'reminders-all' or 'reminders-due' (required)
* @param string $dateTarget target date (format Y-m-d H:i:s). If blank then will test with current date as target.
* @param string $organize_mode Way to organize the results (default or plans)
* @param string $user If a user is set, then will only show rules that user has permission to see
* @param string $test Set to true when only checking if there are alerts (skips the logging then)
* @return string html display output.
*/
function active_alert_summary($patient_id, $mode, $dateTarget = '', $organize_mode = 'default', $user = '', $test = false)
{
// Set date to current if not set
$dateTarget = ($dateTarget) ? $dateTarget : date('Y-m-d H:i:s');
// Collect active actions
$actions = test_rules_clinic('', 'active_alert', $dateTarget, $mode, $patient_id, '', $organize_mode, array(), 'primary', null, null, $user);
if (empty($actions)) {
return false;
}
$returnOutput = "";
$current_targets = array();
// Display the actions
foreach ($actions as $action) {
// Deal with plan names first
if ($action['is_plan']) {
$returnOutput .= "<br /><b>";
$returnOutput .= xlt("Plan") . ": ";
$returnOutput .= generate_display_field(array('data_type' => '1','list_id' => 'clinical_plans'), $action['id']);
$returnOutput .= "</b><br />";
continue;
}
// Display Reminder Details
$returnOutput .= generate_display_field(array('data_type' => '1','list_id' => 'rule_action_category'), $action['category']) .
": " . generate_display_field(array('data_type' => '1','list_id' => 'rule_action'), $action['item']);
// Display due status
if ($action['due_status']) {
// Color code the status (red for past due, purple for due, green for not due and black for soon due)
if ($action['due_status'] == "past_due") {
$returnOutput .= "&nbsp;&nbsp;(<span style='color:red'>";
} elseif ($action['due_status'] == "due") {
$returnOutput .= "&nbsp;&nbsp;(<span style='color:purple'>";
} elseif ($action['due_status'] == "not_due") {
$returnOutput .= "&nbsp;&nbsp;(<span style='color:green'>";
} else {
$returnOutput .= "&nbsp;&nbsp;(<span>";
}
$returnOutput .= generate_display_field(array('data_type' => '1','list_id' => 'rule_reminder_due_opt'), $action['due_status']) . "</span>)<br />";
} else {
$returnOutput .= "<br />";
}
// Add the target(and rule id and room for future elements as needed) to the $current_targets array.
// Only when $mode is reminders-due and $test is FALSE
if (($mode == "reminders-due") && ($test === false) && ($GLOBALS['enable_alert_log'])) {
$target_temp = $action['category'] . ":" . $action['item'];
$current_targets[$target_temp] = array('rule_id' => $action['rule_id'],'due_status' => $action['due_status']);
}
}
// Compare the current with most recent action log (this function will also log the current actions)
// Only when $mode is reminders-due and $test is FALSE
if (($mode == "reminders-due") && ($test === false) && ($GLOBALS['enable_alert_log'])) {
$new_targets = compare_log_alerts($patient_id, $current_targets, 'active_reminder_popup', $_SESSION['authUserID']);
if (!empty($new_targets)) {
$returnOutput .= "<br />" . xlt('New Items (see above for details)') . ":<br />";
foreach ($new_targets as $key => $value) {
$category_item = explode(":", $key);
$category = $category_item[0];
$item = $category_item[1];
$returnOutput .= generate_display_field(array('data_type' => '1','list_id' => 'rule_action_category'), $category) .
': ' . generate_display_field(array('data_type' => '1','list_id' => 'rule_action'), $item) . '<br />';
}
}
}
return $returnOutput;
}
/**
* Process and return allergy conflicts (when a active medication or presciption is on allergy list).
*
* @param integer $patient_id pid of selected patient
* @param string $mode either 'all' or 'new' (required)
* @param string $user If a user is set, then will only show rules that user has permission to see
* @param string $test Set to true when only checking if there are alerts (skips the logging then)
* @return array/boolean Array of allergy alerts or FALSE is empty.
*/
function allergy_conflict($patient_id, $mode, $user, $test = false)
{
// Collect allergies
$sqlParam = array();
$sqlParam[] = $patient_id;
$res_allergies = sqlStatement("SELECT `title` FROM `lists` WHERE `type`='allergy' " .
"AND `activity`=1 " .
"AND ( " .
dateEmptySql('enddate') .
"OR `enddate` > NOW() ) " .
"AND `pid`=?", $sqlParam);
$allergies = array();
for ($iter = 0; $row = sqlFetchArray($res_allergies); $iter++) {
$allergies[$iter] = $row['title'];
}
// Build sql element of IN for below queries
$sqlParam = array();
$sqlIN = '';
$firstFlag = true;
foreach ($allergies as $allergy) {
$sqlParam[] = $allergy;
if ($firstFlag) {
$sqlIN .= "?";
$firstFlag = false;
} else {
$sqlIN .= ",?";
}
}
// Check if allergies conflict with medications or prescriptions
$conflicts_unique = array();
if (!empty($sqlParam)) {
$conflicts = array();
$sqlParam[] = $patient_id;
$res_meds = sqlStatement("SELECT `title` FROM `lists` WHERE `type`='medication' " .
"AND `activity`=1 " .
"AND ( " .
dateEmptySql('enddate') .
"OR `enddate` > NOW() )" .
"AND `title` IN (" . $sqlIN . ") AND `pid`=?", $sqlParam);
while ($urow = sqlFetchArray($res_meds)) {
$conflicts[] = $urow['title'];
}
$res_rx = sqlStatement("SELECT `drug` FROM `prescriptions` WHERE `active`=1 " .
"AND `drug` IN (" . $sqlIN . ") AND `patient_id`=?", $sqlParam);
while ($urow = sqlFetchArray($res_rx)) {
$conflicts[] = $urow['drug'];
}
if (!empty($conflicts)) {
$conflicts_unique = array_unique($conflicts);
}
}
// If there are conflicts, $test is FALSE, and alert logging is on, then run through compare_log_alerts
$new_conflicts = array();
if ((!empty($conflicts_unique)) && $GLOBALS['enable_alert_log'] && ($test === false)) {
$new_conflicts = compare_log_alerts($patient_id, $conflicts_unique, 'allergy_alert', $_SESSION['authUserID'], $mode);
}
if ($mode == 'all') {
if (!empty($conflicts_unique)) {
return $conflicts_unique;
} else {
return false;
}
} else { // $mode = 'new'
if (!empty($new_conflicts)) {
return $new_conflicts;
} else {
return false;
}
}
}
/**
* Compare current alerts with prior (in order to find new actions)
* Also functions to log the actions.
*
* @param integer $patient_id pid of selected patient
* @param array $current_targets array of targets
* @param string $category clinical_reminder_widget, active_reminder_popup, or allergy_alert
* @param integer $userid user id of user.
* @param string $log_trigger if 'all', then always log. If 'new', then only trigger log when a new item noted.
* @return array array with targets with associated rule.
*/
function compare_log_alerts($patient_id, $current_targets, $category = 'clinical_reminder_widget', $userid = '', $log_trigger = 'all')
{
if (empty($userid)) {
$userid = $_SESSION['authUserID'];
}
if (empty($current_targets)) {
$current_targets = array();
}
// Collect most recent action_log
$prior_targets_sql = sqlQuery("SELECT `value` FROM `clinical_rules_log` " .
"WHERE `category` = ? AND `pid` = ? AND `uid` = ? " .
"ORDER BY `id` DESC LIMIT 1", array($category,$patient_id,$userid));
$prior_targets = array();
if (!empty($prior_targets_sql['value'])) {
$prior_targets = json_decode($prior_targets_sql['value'], true);
}
// Compare the current with most recent log
if (($category == 'clinical_reminder_widget') || ($category == 'active_reminder_popup')) {
//using fancy structure to store multiple elements
$new_targets = array_diff_key($current_targets, $prior_targets);
} else { // $category == 'allergy_alert'
//using simple array
$new_targets = array_diff($current_targets, $prior_targets);
}
// Store current action_log and the new items
// If $log_trigger=='all'
// or If $log_trigger=='new' and there are new items
if (($log_trigger == 'all') || (($log_trigger == 'new') && (!empty($new_targets)))) {
$current_targets_json = json_encode($current_targets);
$new_targets_json = '';
if (!empty($new_targets)) {
$new_targets_json = json_encode($new_targets);
}
sqlStatement("INSERT INTO `clinical_rules_log` " .
"(`date`,`pid`,`uid`,`category`,`value`,`new_value`) " .
"VALUES (NOW(),?,?,?,?,?)", array($patient_id,$userid,$category,$current_targets_json,$new_targets_json));
}
// Return new actions (if there are any)
return $new_targets;
}
/**
* Process clinic rules via a batching method to improve performance and decrease memory overhead.
*
* Test the clinic rules of entire clinic and create a report or patient reminders (can also test
* on one patient or patients of one provider). The structure of the returned results is dependent on the
* $organize_mode and $mode parameters.
* <pre>The results are dependent on the $organize_mode parameter settings
* 'default' organize_mode:
* Returns a two-dimensional array of results organized by rules (dependent on the following $mode settings):
* 'reminders-due' mode - returns an array of reminders (action array elements plus a 'pid' and 'due_status')
* 'reminders-all' mode - returns an array of reminders (action array elements plus a 'pid' and 'due_status')
* 'report' mode - returns an array of rows for the Clinical Quality Measures (CQM) report
* 'plans' organize_mode:
* Returns similar to default, but organizes by the active plans
* </pre>
*
* @param integer $provider id of a selected provider. If blank, then will test entire clinic. If 'collate_outer' or 'collate_inner', then will test each provider in entire clinic; outer will nest plans inside collated providers, while inner will nest the providers inside the plans (note inner and outer are only different if organize_mode is set to plans).
* @param string $type rule filter (active_alert,passive_alert,cqm,cqm_2011,cqm_2014,amc,amc_2011,amc_2014,patient_reminder). If blank then will test all rules.
* @param string/array $dateTarget target date (format Y-m-d H:i:s). If blank then will test with current date as target. If an array, then is holding two dates ('dateBegin' and 'dateTarget').
* @param string $mode choose either 'report' or 'reminders-all' or 'reminders-due' (required)
* @param string $plan test for specific plan only
* @param string $organize_mode Way to organize the results (default, plans). See above for organization structure of the results.
* @param array $options can hold various option (for now, used to hold the manual number of labs for the AMC report)
* @param string $pat_prov_rel How to choose patients that are related to a chosen provider. 'primary' selects patients that the provider is set as primary provider. 'encounter' selectes patients that the provider has seen. This parameter is only applicable if the $provider parameter is set to a provider or collation setting.
* @param integer $batchSize number of patients to batch (default is 100; plan to optimize this default setting in the future)
* @param integer $report_id id of report in database (if already bookmarked)
* @return array See above for organization structure of the results.
*/
function test_rules_clinic_batch_method($provider = '', $type = '', $dateTarget = '', $mode = '', $plan = '', $organize_mode = 'default', $options = array(), $pat_prov_rel = 'primary', $batchSize = '', $report_id = null)
{
// Default to a batchsize, if empty
if (empty($batchSize)) {
$batchSize = 100;
}
// Collect total number of pertinent patients (to calculate batching parameters)
// note for group_calculation we will have some inefficiencies here
$totalNumPatients = (int)buildPatientArray('', $provider, $pat_prov_rel, null, null, true);
// Cycle through the batches and collect/combine results
if (($totalNumPatients % $batchSize) > 0) {
// not perfectly divisible
$totalNumberBatches = floor($totalNumPatients / $batchSize) + 1;
} else {
// perfectly divisible
$totalNumberBatches = floor($totalNumPatients / $batchSize);
}
(new SystemLogger())->debug(
"test_rules_clinic_batch_method()",
['totalNumPatients' => $totalNumPatients, 'totalNumberBatches' => $totalNumberBatches]
);
// Fix things in the $options array(). This now stores the number of labs to be used in the denominator in the AMC report.
// The problem with this variable is that is is added in every batch. So need to fix it by dividing this number by the number
// of planned batches(note the fixed array will go into the test_rules_clinic function, however the original will be used
// in the report storing/tracking engine.
$options_modified = $options;
if (!empty($options_modified['labs_manual'])) {
$options_modified['labs_manual'] = $options_modified['labs_manual'] / $totalNumberBatches;
}
// Prepare the database to track/store results
$fields = array('provider' => $provider,'mode' => $mode,'plan' => $plan,'organize_mode' => $organize_mode,'pat_prov_rel' => $pat_prov_rel);
if (is_array($dateTarget)) {
$fields = array_merge($fields, array('date_target' => $dateTarget['dateTarget']));
$fields = array_merge($fields, array('date_begin' => $dateTarget['dateBegin']));
} else {
if (empty($dateTarget)) {
$fields = array_merge($fields, array('date_target' => date("Y-m-d H:i:s")));
} else {
$fields = array_merge($fields, array('date_target' => $dateTarget));
}
}
if (!empty($options)) {
foreach ($options as $key => $value) {
$fields = array_merge($fields, array($key => $value));
}
}
$report_id = beginReportDatabase($type, $fields, $report_id);
setTotalItemsReportDatabase($report_id, $totalNumPatients);
// Set ability to itemize report if this feature is turned on
if (
( ($type == "active_alert" || $type == "passive_alert") && ($GLOBALS['report_itemizing_standard']) ) ||
( ($type == "cqm" || $type == "cqm_2011" || $type == "cqm_2014") && ($GLOBALS['report_itemizing_cqm']) ) ||
( (CertificationReportTypes::isAMCReportType($type)) && ($GLOBALS['report_itemizing_amc']) )
) {
$GLOBALS['report_itemizing_temp_flag_and_id'] = $report_id;
} else {
$GLOBALS['report_itemizing_temp_flag_and_id'] = 0;
}
for ($i = 0; $i < $totalNumberBatches; $i++) {
// If itemization is turned on, then reset the rule id iterator
if ($GLOBALS['report_itemizing_temp_flag_and_id']) {
$GLOBALS['report_itemized_test_id_iterator'] = 1;
}
$dataSheet_batch = test_rules_clinic($provider, $type, $dateTarget, $mode, '', $plan, $organize_mode, $options_modified, $pat_prov_rel, (($batchSize * $i) + 1), $batchSize);
$dataSheet = array();
if ($i == 0) {
// For first cycle, simply copy it to dataSheet
$dataSheet = $dataSheet_batch;
} else {
//debug
//error_log("CDR: ".print_r($dataSheet,TRUE),0);
//error_log("CDR: ".($batchSize*$i)." records",0);
// Integrate batch results into main dataSheet
foreach ($dataSheet_batch as $key => $row) {
if (!$row['is_sub']) {
//skip this stuff for the sub entries (and use previous main entry in percentage calculation)
$total_patients = $dataSheet[$key]['total_patients'] + $row['total_patients'];
$dataSheet[$key]['total_patients'] = $total_patients;
$excluded = $dataSheet[$key]['excluded'] + $row['excluded'];
$dataSheet[$key]['excluded'] = $excluded;
$pass_filter = $dataSheet[$key]['pass_filter'] + $row['pass_filter'];
$dataSheet[$key]['pass_filter'] = $pass_filter;
}
$pass_target = $dataSheet[$key]['pass_target'] + $row['pass_target'];
$dataSheet[$key]['pass_target'] = $pass_target;
$dataSheet[$key]['percentage'] = calculate_percentage($pass_filter, $excluded, $pass_target);
}
}
//Update database to track results
updateReportDatabase($report_id, ($total_patients ?? null));
}
// Record results in database and send to screen, if applicable.
if (!empty($dataSheet)) {
finishReportDatabase($report_id, json_encode($dataSheet));
return $dataSheet;
} else {
// make sure the report at least completes even if we have nothing here.
finishReportDatabase($report_id, json_encode([]));
return [];
}
}
function rules_clinic_get_providers($billing_facility, $pat_prov_rel)
{
$results = [];
if ($pat_prov_rel == "encounter") {
$rez = sqlStatementCdrEngine(
"SELECT id AS provider_id, lname, fname, npi, federaltaxid FROM users WHERE authorized = 1 AND users.id IN( "
. " SELECT DISTINCT `provider_id` FROM `form_encounter` WHERE `provider_id` IS NOT NULL and `billing_facility` = ? "
. " UNION SELECT DISTINCT `supervisor_id` AS `provider_id` FROM `form_encounter` WHERE `supervisor_id` "
. " IS NOT NULL and `billing_facility` = ? "
. ") "
. " ORDER BY provider_id ",
array($billing_facility, $billing_facility)
);
} else if ($pat_prov_rel == "primary") {
$rez = sqlStatementCdrEngine(
"SELECT id AS provider_id , lname, fname, npi, federaltaxid FROM users WHERE authorized = 1 AND users.id IN ( "
. "SELECT DISTINCT `providerID` AS provider_id FROM `patient_data` JOIN `users` providers ON providerID=providers.id "
. " WHERE `providers`.billing_facility_id = ? "
. ") "
. " ORDER BY provider_id ",
array($billing_facility)
);
}
if (!empty($rez)) {
while ($urow = sqlFetchArray($rez)) {
$results[] = $urow;
}
}
return $results;
}
/**
* Process clinic rules for the group_calculation provider method. This will process clinical rules for each of the
* billing facilities in the entire organization. Rules are applied to the entire facility where patients are connected
* to the billing facility either through encounters or their primary care provider. Rules are then applied to each
* individual provider who is connected to the billing facility. This satisifies regulatory requirements where rule
* calculations must be able to group results for one or more provider NPIs to a group tax id number (TIN). One example
* of this is in the United States where providers can reassign their medicaid/medicare reimbursements to another TIN and
* need to report on calculations at both the group and provider group level.
*
* @param string $type rule filter (active_alert,passive_alert,cqm,cqm_2011,cqm_2104,amc,amc_2011,amc_2014,patient_reminder). If blank then will test all rules.
* @param string/array $dateArray Date filter to run the calculation on. Should have two keys ('dateBegin' and 'dateTarget').
* @param string $mode choose either 'report' or 'reminders-all' or 'reminders-due' (required)
* @param integer $patient_id pid of patient. If blank then will check all patients.
* @param string $plan test for specific plan only
* @param string $organize_mode Way to organize the results (default, plans). See above for organization structure of the results.
* @param array $options can hold various option (for now, used to hold the manual number of labs for the AMC report)
* @param string $pat_prov_rel How to choose patients that are related to a chosen provider. 'primary' selects patients that the provider is set as primary provider. 'encounter' selectes patients that the provider has seen.
* @param integer $start applicable patient to start at (when batching process)
* @param integer $batchSize number of patients to batch (when batching process)
* @param string $user If a user is set, then will only show rules that user has permission to see(only applicable for per patient and not when do reports).
* @return array See above for organization structure of the results.
*/
function test_rules_clinic_group_calculation($type = '', array $dateArray = array(), $mode = '', $patient_id = '', $plan = '', $organize_mode = 'default', $options = array(), $pat_prov_rel = 'primary', $start = null, $batchSize = null, $user = '')
{
(new SystemLogger())->debug(
"test_rules_clinic_group_calculation()",
array_combine(
['type', 'dateArray', 'mode', 'patient_id', 'plan', 'organize_mode'
,
'options',
'pat_prov_rel',
'start',
'batchSize',
'user'],
func_get_args()
)
);
$results = [];
$facilityService = new FacilityService();
$billingLocations = $facilityService->getAllBillingLocations();
if (!empty($billingLocations)) {
//Collect applicable rules
// Note that due to a limitation in the this function, the patient_id is explicitly
// for grouping items when not being done in real-time or for official reporting.
// So for cases such as patient reminders on a clinic scale, the calling function
// will actually need rather than pass in a explicit patient_id for each patient in
// a separate call to this function.
$rules = resolve_rules_sql($type, $patient_id, false, $plan, $user);
$filteredRules = array_filter($rules, function ($rule) {
return $rule['amc_flag'] || $rule['cqm_flag'];
});
// TODO: @adunsulag I'd prefer to use a service here, but in order to be consistent with everything else in this file we will use sqlStatementCdrEngine
$sql = "SELECT id, name, federal_ein, facility_npi, tax_id_type FROM facility WHERE facility.billing_location = 1 "
. " AND id IN (SELECT DISTINCT billing_facility FROM form_encounter) "
. " ORDER BY facility.id ASC";
$frez = sqlStatementCdrEngine($sql);
while ($frow = sqlFetchArray($frez)) {
// we run with the encounter_billing_facility
$options['billing_facility_id'] = $frow['id'];
$patientData = buildPatientArray($patient_id, 'group_calculation', $pat_prov_rel, $start, $batchSize, false, $frow['id']);
(new SystemLogger())->debug(
"test_rules_clinic_group_calculation() patientIds retrieved for facility",
['facilityId' => $frow['id'], 'patientData' => $patientData]
);
if (!empty($patientData)) {
$group_item = [];
$group_item['is_provider_group'] = true;
$group_item['name'] = $frow['name'];
$group_item['npi'] = $frow['facility_npi'];
$group_item['federaltaxid'] = $frow['federal_ein'];
$results[] = $group_item;
foreach ($filteredRules as $rowRule) {
$tempResults = test_rules_clinic_cqm_amc_rule($rowRule, $patientData, $dateArray, $dateArray, $options, null, $pat_prov_rel);
if (!empty($tempResults)) {
$results = array_merge($results, $tempResults);
}
(new SystemLogger())->debug(
"test_rules_clinic_group_calculation() results returned for facility",
['facilityId' => $frow['id'], 'results' => $tempResults]
);
}
// now we are going to do our providers
$providers = rules_clinic_get_providers($frow['id'], $pat_prov_rel);
if (!empty($providers)) { // should always be populated here
$facility_pat_prov_rel = $pat_prov_rel . "_billing_facility";
foreach ($providers as $prov) {
$newResults = test_rules_clinic($prov['provider_id'], $type, $dateArray, $mode, $patient_id, $plan, $organize_mode, $options, $facility_pat_prov_rel, $start, $batchSize, $user);
if (!empty($newResults)) {
$provider_item['is_provider'] = true;
$provider_item['is_provider_in_group'] = true;
$provider_item['group'] = [
'name' => $frow['name']
,'npi' => $frow['facility_npi']
,'federaltaxid' => $frow['federal_ein']
];
$provider_item['prov_lname'] = $prov['lname'];
$provider_item['prov_fname'] = $prov['fname'];
$provider_item['npi'] = $prov['npi'];
$provider_item['federaltaxid'] = $prov['federaltaxid'];
$results[] = $provider_item;
$results = array_merge($results, $newResults);
}
}
}
}
}
}
return $results;
}
/**
* Process clinic rules for the collate outer and collate inner methods
*
* Test the clinic rules of entire clinic and create a report or patient reminders (can also test
* on one patient or patients of one provider). The structure of the returned results is dependent on the
* $organize_mode and $mode parameters.
* <pre>The results are dependent on the $organize_mode parameter settings
* 'default' organize_mode:
* Returns a two-dimensional array of results organized by rules (dependent on the following $mode settings):
* 'reminders-due' mode - returns an array of reminders (action array elements plus a 'pid' and 'due_status')
* 'reminders-all' mode - returns an array of reminders (action array elements plus a 'pid' and 'due_status')
* 'report' mode - returns an array of rows for the Clinical Quality Measures (CQM) report
* 'plans' organize_mode:
* Returns similar to default, but organizes by the active plans
* </pre>
*
* @param integer $provider id of a selected provider. If blank, then will test entire clinic. If 'collate_outer' or 'collate_inner', then will test each provider in entire clinic; outer will nest plans inside collated providers, while inner will nest the providers inside the plans (note inner and outer are only different if organize_mode is set to plans).
* @param string $type rule filter (active_alert,passive_alert,cqm,cqm_2011,cqm_2104,amc,amc_2011,amc_2014,patient_reminder). If blank then will test all rules.
* @param string/array $dateTarget target date (format Y-m-d H:i:s). If blank then will test with current date as target. If an array, then is holding two dates ('dateBegin' and 'dateTarget').
* @param string $mode choose either 'report' or 'reminders-all' or 'reminders-due' (required)
* @param integer $patient_id pid of patient. If blank then will check all patients.
* @param string $plan test for specific plan only
* @param string $organize_mode Way to organize the results (default, plans). See above for organization structure of the results.
* @param array $options can hold various option (for now, used to hold the manual number of labs for the AMC report)
* @param string $pat_prov_rel How to choose patients that are related to a chosen provider. 'primary' selects patients that the provider is set as primary provider. 'encounter' selectes patients that the provider has seen. This parameter is only applicable if the $provider parameter is set to a provider or collation setting.
* @param integer $start applicable patient to start at (when batching process)
* @param integer $batchSize number of patients to batch (when batching process)
* @param string $user If a user is set, then will only show rules that user has permission to see(only applicable for per patient and not when do reports).
* @return array See above for organization structure of the results.
*/
function test_rules_clinic_collate($provider = '', $type = '', $dateTarget = '', $mode = '', $patient_id = '', $plan = '', $organize_mode = 'default', $options = array(), $pat_prov_rel = 'primary', $start = null, $batchSize = null, $user = '')
{
$results = [];
// If set the $provider to collate_outer (or collate_inner without plans organize mode),
// then run through this function recursively and return results.
if (($provider === "collate_outer") || ($provider === "collate_inner" && $organize_mode !== 'plans')) {
// First, collect an array of all providers
$query = "SELECT id, lname, fname, npi, federaltaxid FROM users WHERE authorized = 1 ORDER BY lname, fname";
$ures = sqlStatementCdrEngine($query);
// Second, run through each provider recursively
while ($urow = sqlFetchArray($ures)) {
$newResults = test_rules_clinic($urow['id'], $type, $dateTarget, $mode, $patient_id, $plan, $organize_mode, $options, $pat_prov_rel, $start, $batchSize, $user);
if (!empty($newResults)) {
$provider_item['is_provider'] = true;
$provider_item['prov_lname'] = $urow['lname'];
$provider_item['prov_fname'] = $urow['fname'];
$provider_item['npi'] = $urow['npi'];
$provider_item['federaltaxid'] = $urow['federaltaxid'];
$results[] = $provider_item;
$results = array_merge($results, $newResults);
}
}
// done, so now can return results
return $results;
}
// If set organize-mode to plans, then collects active plans and run through this
// function recursively and return results.
if ($organize_mode === "plans") {
// First, collect active plans
$plans_resolve = resolve_plans_sql($plan, $patient_id);
// Second, run through function recursively
foreach ($plans_resolve as $plan_item) {
// (if collate_inner, then nest a collation of providers within each plan)
if ($provider === "collate_inner") {
// First, collect an array of all providers
$query = "SELECT id, lname, fname, npi, federaltaxid FROM users WHERE authorized = 1 ORDER BY lname, fname";
$ures = sqlStatementCdrEngine($query);
// Second, run through each provider recursively
$provider_results = array();
while ($urow = sqlFetchArray($ures)) {
$newResults = test_rules_clinic($urow['id'], $type, $dateTarget, $mode, $patient_id, $plan_item['id'], 'default', $options, $pat_prov_rel, $start, $batchSize, $user);
if (!empty($newResults)) {
$provider_item['is_provider'] = true;
$provider_item['prov_lname'] = $urow['lname'];
$provider_item['prov_fname'] = $urow['fname'];
$provider_item['npi'] = $urow['npi'];
$provider_item['federaltaxid'] = $urow['federaltaxid'];
$provider_results[] = $provider_item;
$provider_results = array_merge($provider_results, $newResults);
}
}
if (!empty($provider_results)) {
$plan_item['is_plan'] = true;
$results[] = $plan_item;
$results = array_merge($results, $provider_results);
}
} else {
// (not collate_inner, so do not nest providers within each plan)
$newResults = test_rules_clinic($provider, $type, $dateTarget, $mode, $patient_id, $plan_item['id'], 'default', $options, $pat_prov_rel, $start, $batchSize, $user);
if (!empty($newResults)) {
$plan_item['is_plan'] = true;
$results[] = $plan_item;
$results = array_merge($results, $newResults);
}
}
}
// done, so now can return results
return $results;
}
}
/**
* Runs the AMC or CQM calculations for a given rule.
* @param $rowRule The rule we are going to run calculcations against
* @param $patientData The list of patient pids we are going to calculate our rules on
* @param $dateArray The start and end date of the rule for AMC calculation purposes
* @param $dateTarget The end date of the rule for CQM purposes
* @param $options Any options needed for AMC/CQM processing
* @return array The list of rule calculations that have been generated
* @throws Exception If a rule is invalid or not found
*/
function test_rules_clinic_cqm_amc_rule($rowRule, $patientData, $dateArray, $dateTarget, $options, $provider, $pat_prov_rel)
{
// we need to give more context to some of our rules
$ruleOptions = $options;
$ruleOptions['pat_prov_rel'] = $pat_prov_rel;
if (is_numeric($provider)) {
$ruleOptions['provider_id'] = $provider;
}
require_once(dirname(__FILE__) . "/classes/rulesets/ReportManager.php");
$manager = new ReportManager();
if ($rowRule['amc_flag']) {
// Send array of dates ('dateBegin' and 'dateTarget')
$tempResults = $manager->runReport($rowRule, $patientData, $dateArray, $ruleOptions);
} else {
// Send target date
$tempResults = $manager->runReport($rowRule, $patientData, $dateTarget);
}
return $tempResults;
}
/**
* Process clinic rules.
*
* Test the clinic rules of entire clinic and create a report or patient reminders (can also test
* on one patient or patients of one provider). The structure of the returned results is dependent on the
* $organize_mode and $mode parameters.
* <pre>The results are dependent on the $organize_mode parameter settings
* 'default' organize_mode:
* Returns a two-dimensional array of results organized by rules (dependent on the following $mode settings):
* 'reminders-due' mode - returns an array of reminders (action array elements plus a 'pid' and 'due_status')
* 'reminders-all' mode - returns an array of reminders (action array elements plus a 'pid' and 'due_status')
* 'report' mode - returns an array of rows for the Clinical Quality Measures (CQM) report
* 'plans' organize_mode:
* Returns similar to default, but organizes by the active plans
* </pre>
*
* @param integer $provider id of a selected provider. If blank, then will test entire clinic. If 'collate_outer' or 'collate_inner', then will test each provider in entire clinic; outer will nest plans inside collated providers, while inner will nest the providers inside the plans (note inner and outer are only different if organize_mode is set to plans).
* @param string $type rule filter (active_alert,passive_alert,cqm,cqm_2011,cqm_2104,amc,amc_2011,amc_2014,patient_reminder). If blank then will test all rules.
* @param string/array $dateTarget target date (format Y-m-d H:i:s). If blank then will test with current date as target. If an array, then is holding two dates ('dateBegin' and 'dateTarget').
* @param string $mode choose either 'report' or 'reminders-all' or 'reminders-due' (required)
* @param integer $patient_id pid of patient. If blank then will check all patients.
* @param string $plan test for specific plan only
* @param string $organize_mode Way to organize the results (default, plans). See above for organization structure of the results.
* @param array $options can hold various option (for now, used to hold the manual number of labs for the AMC report)
* @param string $pat_prov_rel How to choose patients that are related to a chosen provider. 'primary' selects patients that the provider is set as primary provider. 'encounter' selectes patients that the provider has seen. This parameter is only applicable if the $provider parameter is set to a provider or collation setting.
* @param integer $start applicable patient to start at (when batching process)
* @param integer $batchSize number of patients to batch (when batching process)
* @param string $user If a user is set, then will only show rules that user has permission to see(only applicable for per patient and not when do reports).
* @return array See above for organization structure of the results.
*/
function test_rules_clinic($provider = '', $type = '', $dateTarget = '', $mode = '', $patient_id = '', $plan = '', $organize_mode = 'default', $options = array(), $pat_prov_rel = 'primary', $start = null, $batchSize = null, $user = '')
{
// If dateTarget is an array, then organize them.
if (is_array($dateTarget)) {
$dateArray = $dateTarget;
$dateTarget = $dateTarget['dateTarget'];
} else {
$dateArray = [];
}
// Set date to current if not set
$dateTarget = ($dateTarget) ? $dateTarget : date('Y-m-d H:i:s');
// Prepare the results array
$results = array();
// we have a special mechanism for collation or plans organize method
if ($provider === "collate_outer" || $organize_mode === 'plans') {
return test_rules_clinic_collate($provider, $type, $dateTarget, $mode, $patient_id, $plan, $organize_mode, $options, $pat_prov_rel, $start, $batchSize, $user);
}
if ($provider === "group_calculation") {
return test_rules_clinic_group_calculation($type, $dateArray, $mode, $patient_id, $plan, $organize_mode, $options, $pat_prov_rel, $start, $batchSize, $user);
}
// Collect applicable patient pids
$patientData = buildPatientArray($patient_id, $provider, $pat_prov_rel, $start, $batchSize, false, $options['billing_facility_id'] ?? null);
// Go through each patient(s)
//
// If in report mode, then tabulate for each rule:
// Total Patients
// Patients that pass the filter
// Patients that pass the target
// If in reminders mode, then create reminders for each rule:
// Reminder that action is due soon
// Reminder that action is due
// Reminder that action is post-due
//Collect applicable rules
// Note that due to a limitation in the this function, the patient_id is explicitly
// for grouping items when not being done in real-time or for official reporting.
// So for cases such as patient reminders on a clinic scale, the calling function
// will actually need rather than pass in a explicit patient_id for each patient in
// a separate call to this function.
$rules = resolve_rules_sql($type, $patient_id, false, $plan, $user);
foreach ($rules as $rowRule) {
// If using cqm or amc type, then use the hard-coded rules set.
// Note these rules are only used in report mode.
if ($rowRule['cqm_flag'] || $rowRule['amc_flag']) {
$tempResults = test_rules_clinic_cqm_amc_rule($rowRule, $patientData, $dateArray, $dateTarget, $options, $provider, $pat_prov_rel);
$results = array_merge($results, $tempResults);
// Go on to the next rule
continue;
}
// ALL OF THE BELOW RULES ARE FOR active_alert, passive_alert,patient_reminder
// If in reminder mode then need to collect the measurement dates
// from rule_reminder table
$target_dates = array();
if ($mode != "report") {
// Calculate the dates to check for
if ($type == "patient_reminder") {
$reminder_interval_type = "patient_reminder";
} else { // $type == "passive_alert" or $type == "active_alert"
$reminder_interval_type = "clinical_reminder";
}
$target_dates = calculate_reminder_dates($rowRule['id'], $dateTarget, $reminder_interval_type);
} else { // $mode == "report"
// Only use the target date in the report
$target_dates[0] = $dateTarget;
}
//Reset the counters
$total_patients = 0;
$pass_filter = 0;
$exclude_filter = 0;
$pass_target = 0;
// Find the number of target groups
$targetGroups = returnTargetGroups($rowRule['id']);
if ((count($targetGroups) == 1) || ($mode == "report")) {
// If report itemization is turned on, then iterate the rule id iterator
if (!empty($GLOBALS['report_itemizing_temp_flag_and_id'])) {
$GLOBALS['report_itemized_test_id_iterator']++;
}
//skip this section if not report and more than one target group
foreach ($patientData as $rowPatient) {
// First, deal with deceased patients
// (for now will simply skip the patient)
// If want to support rules for deceased patients then will need to migrate this below
// in target_dates foreach(guessing won't ever need to do this, though).
// Note using the dateTarget rather than dateFocus
if (is_patient_deceased($rowPatient['pid'], $dateTarget)) {
continue;
}
// Count the total patients
$total_patients++;
$dateCounter = 1; // for reminder mode to keep track of which date checking
// If report itemization is turned on, reset flag.
if (!empty($GLOBALS['report_itemizing_temp_flag_and_id'])) {
$temp_track_pass = 1;
}
foreach ($target_dates as $dateFocus) {
//Skip if date is set to SKIP
if ($dateFocus == "SKIP") {
$dateCounter++;
continue;
}
//Set date counter and reminder token (applicable for reminders only)
if ($dateCounter == 1) {
$reminder_due = "soon_due";
} elseif ($dateCounter == 2) {
$reminder_due = "due";
} else { // $dateCounter == 3
$reminder_due = "past_due";
}
// Check if pass filter
$passFilter = test_filter($rowPatient['pid'], $rowRule['id'], $dateFocus);
if ($passFilter === "EXCLUDED") {
// increment EXCLUDED and pass_filter counters
// and set as FALSE for reminder functionality.
$pass_filter++;
$exclude_filter++;
$passFilter = false;
}
if ($passFilter) {
// increment pass filter counter
$pass_filter++;
// If report itemization is turned on, trigger flag.
if (!empty($GLOBALS['report_itemizing_temp_flag_and_id'])) {
$temp_track_pass = 0;
}
} else {
$dateCounter++;
continue;
}
// Check if pass target
$passTarget = test_targets($rowPatient['pid'], $rowRule['id'], '', $dateFocus);
if ($passTarget) {
// increment pass target counter
$pass_target++;
// If report itemization is turned on, then record the "passed" item and set the flag
if (!empty($GLOBALS['report_itemizing_temp_flag_and_id'])) {
insertItemReportTracker($GLOBALS['report_itemizing_temp_flag_and_id'], $GLOBALS['report_itemized_test_id_iterator'], 1, $rowPatient['pid']);
$temp_track_pass = 1;
}
// send to reminder results
if ($mode == "reminders-all") {
// place the completed actions into the reminder return array
$actionArray = resolve_action_sql($rowRule['id'], '1');
foreach ($actionArray as $action) {
$action_plus = $action;
$action_plus['due_status'] = "not_due";
$action_plus['pid'] = $rowPatient['pid'];
$action_plus['rule_id'] = $rowRule['id'];
$results = reminder_results_integrate($results, $action_plus);
}
}
break;
} else {
// send to reminder results
if ($mode != "report") {
// place the uncompleted actions into the reminder return array
$actionArray = resolve_action_sql($rowRule['id'], '1');
foreach ($actionArray as $action) {
$action_plus = $action;
$action_plus['due_status'] = $reminder_due;
$action_plus['pid'] = $rowPatient['pid'];
$action_plus['rule_id'] = $rowRule['id'];
$results = reminder_results_integrate($results, $action_plus);
}
}
}
$dateCounter++;
}
// If report itemization is turned on, then record the "failed" item if it did not pass
if (!empty($GLOBALS['report_itemizing_temp_flag_and_id']) && !($temp_track_pass)) {
insertItemReportTracker($GLOBALS['report_itemizing_temp_flag_and_id'], $GLOBALS['report_itemized_test_id_iterator'], 0, $rowPatient['pid']);
}
}
}
// Calculate and save the data for the rule
$percentage = calculate_percentage($pass_filter, $exclude_filter, $pass_target);
if ($mode == "report") {
$newRow = array('is_main' => true,'total_patients' => $total_patients,'excluded' => $exclude_filter,'pass_filter' => $pass_filter,'pass_target' => $pass_target,'percentage' => $percentage);
$newRow = array_merge($newRow, $rowRule);
// If itemization is turned on, then record the itemized_test_id
if ($GLOBALS['report_itemizing_temp_flag_and_id']) {
$newRow = array_merge($newRow, array('itemized_test_id' => $GLOBALS['report_itemized_test_id_iterator']));
}
$results[] = $newRow;
}
// Now run through the target groups if more than one
if (count($targetGroups) > 1) {
foreach ($targetGroups as $i) {
// If report itemization is turned on, then iterate the rule id iterator
if (!empty($GLOBALS['report_itemizing_temp_flag_and_id'])) {
$GLOBALS['report_itemized_test_id_iterator']++;
}
//Reset the target counter
$pass_target = 0;
foreach ($patientData as $rowPatient) {
// First, deal with deceased patients
// (for now will simply skip the patient)
// If want to support rules for deceased patients then will need to migrate this below
// in target_dates foreach(guessing won't ever need to do this, though).
// Note using the dateTarget rather than dateFocus
if (is_patient_deceased($rowPatient['pid'], $dateTarget)) {
continue;
}
$dateCounter = 1; // for reminder mode to keep track of which date checking
// If report itemization is turned on, reset flag.
if (!empty($GLOBALS['report_itemizing_temp_flag_and_id'])) {
$temp_track_pass = 1;
}
foreach ($target_dates as $dateFocus) {
//Skip if date is set to SKIP
if ($dateFocus == "SKIP") {
$dateCounter++;
continue;
}
//Set date counter and reminder token (applicable for reminders only)
if ($dateCounter == 1) {
$reminder_due = "soon_due";
} elseif ($dateCounter == 2) {
$reminder_due = "due";
} else { // $dateCounter == 3
$reminder_due = "past_due";
}
// Check if pass filter
$passFilter = test_filter($rowPatient['pid'], $rowRule['id'], $dateFocus);
if ($passFilter === "EXCLUDED") {
$passFilter = false;
}
if (!$passFilter) {
$dateCounter++;
continue;
} else {
// If report itemization is turned on, trigger flag.
if (!empty($GLOBALS['report_itemizing_temp_flag_and_id'])) {
$temp_track_pass = 0;
}
}
//Check if pass target
$passTarget = test_targets($rowPatient['pid'], $rowRule['id'], $i, $dateFocus);
if ($passTarget) {
// increment pass target counter
$pass_target++;
// If report itemization is turned on, then record the "passed" item and set the flag
if ($GLOBALS['report_itemizing_temp_flag_and_id']) {
insertItemReportTracker($GLOBALS['report_itemizing_temp_flag_and_id'], $GLOBALS['report_itemized_test_id_iterator'], 1, $rowPatient['pid']);
$temp_track_pass = 1;
}
// send to reminder results
if ($mode == "reminders-all") {
// place the completed actions into the reminder return array
$actionArray = resolve_action_sql($rowRule['id'], $i);
foreach ($actionArray as $action) {
$action_plus = $action;
$action_plus['due_status'] = "not_due";
$action_plus['pid'] = $rowPatient['pid'];
$action_plus['rule_id'] = $rowRule['id'];
$results = reminder_results_integrate($results, $action_plus);
}
}
break;
} else {
// send to reminder results
if ($mode != "report") {
// place the actions into the reminder return array
$actionArray = resolve_action_sql($rowRule['id'], $i);
foreach ($actionArray as $action) {
$action_plus = $action;
$action_plus['due_status'] = $reminder_due;
$action_plus['pid'] = $rowPatient['pid'];
$action_plus['rule_id'] = $rowRule['id'];
$results = reminder_results_integrate($results, $action_plus);
}
}
}
$dateCounter++;
}
// If report itemization is turned on, then record the "failed" item if it did not pass
if (!empty($GLOBALS['report_itemizing_temp_flag_and_id']) && !($temp_track_pass)) {
insertItemReportTracker($GLOBALS['report_itemizing_temp_flag_and_id'], $GLOBALS['report_itemized_test_id_iterator'], 0, $rowPatient['pid']);
}
}
// Calculate and save the data for the rule
$percentage = calculate_percentage($pass_filter, $exclude_filter, $pass_target);
// Collect action for title (just use the first one, if more than one)
$actionArray = resolve_action_sql($rowRule['id'], $i);
$action = $actionArray[0];
if ($mode == "report") {
$newRow = array('is_sub' => true,'action_category' => $action['category'],'action_item' => $action['item'],'total_patients' => '','excluded' => '','pass_filter' => '','pass_target' => $pass_target,'percentage' => $percentage);
// If itemization is turned on, then record the itemized_test_id
if ($GLOBALS['report_itemizing_temp_flag_and_id']) {
$newRow = array_merge($newRow, array('itemized_test_id' => $GLOBALS['report_itemized_test_id_iterator']));
}
$results[] = $newRow;
}
}
}
}
// Return the data
return $results;
}
/**
* Process patient array that is to be tested.
*
* @param integer $provider id of a selected provider. If blank, then will test entire clinic.
* @param integer $patient_id pid of patient. If blank then will check all patients.
* @param string $pat_prov_rel How to choose patients that are related to a chosen provider. 'primary' selects patients that the provider is set as primary provider. 'encounter' selectes patients that the provider has seen. This parameter is only applicable if the $provider parameter is set to a provider or collation setting.
* @param integer $start applicable patient to start at (when batching process)
* @param integer $batchSize number of patients to batch (when batching process)
* @param boolean $onlyCount If true, then will just return the total number of applicable records (ignores batching parameters)
* @param integer $billing_facility id of the billing facility to constrain patient relationships to
* @return array/integer Array of patient pid values or number total pertinent patients (if $onlyCount is TRUE)
*/
function buildPatientArray($patient_id = '', $provider = '', $pat_prov_rel = 'primary', $start = null, $batchSize = null, $onlyCount = false, $billing_facility = null)
{
(new SystemLogger())->debug(
"buildPatientArray()",
['patient_id' => $patient_id, 'provider' => $provider, 'pat_prov_rel' => $pat_prov_rel, 'start' => $start
,
'batchSize' => $batchSize,
'onlyCount' => $onlyCount,
'billing_facility' => $billing_facility]
);
$patientData = [];
if (!empty($patient_id)) {
// only look at the selected patient
if ($onlyCount) {
$patientNumber = 1;
} else {
$patientData[0]['pid'] = $patient_id;
}
} else {
if (empty($provider)) {
// Look at entire practice
if ($start == null || $batchSize == null || $onlyCount) {
$rez = sqlStatementCdrEngine("SELECT `pid` FROM `patient_data` ORDER BY `pid`");
if ($onlyCount) {
$patientNumber = sqlNumRows($rez);
}
} else {
// batching
$rez = sqlStatementCdrEngine("SELECT `pid` FROM `patient_data` ORDER BY `pid` LIMIT ?,?", array(($start - 1),$batchSize));
}
} else {
// Look at an individual physician
if ($provider == 'group_calculation' && $pat_prov_rel == 'encounter') {
return buildPatientArrayEncounterBillingFacility($start, $batchSize, $onlyCount, $billing_facility);
} else if ($provider == 'group_calculation' && $pat_prov_rel == 'primary') {
return buildPatientArrayPrimaryProviderBillingFacility($start, $batchSize, $onlyCount, $billing_facility);
} else if ($pat_prov_rel == 'encounter_billing_facility' && is_numeric($provider)) {
return buildPatientArrayEncounterBillingFacility($start, $batchSize, $onlyCount, $billing_facility, $provider);
} else if ($pat_prov_rel == 'primary_billing_facility' && is_numeric($provider)) {
return buildPatientArrayPrimaryProviderBillingFacility($start, $batchSize, $onlyCount, $billing_facility, $provider);
} else if ($pat_prov_rel == 'encounter') {
// Choose patients that are related to specific physician by an encounter (OR the provider was a referral originator)
$sql = "select DISTINCT `pid` FROM `form_encounter` WHERE `provider_id` =? OR `supervisor_id` = ? "
. " UNION select DISTINCT `transactions`.`pid` FROM transactions "
. " INNER JOIN lbt_data ON lbt_data.form_id = transactions.id AND lbt_data.field_id = 'refer_from' AND lbt_data.field_value = ? "
. " ORDER BY `pid`";
if ($start == null || $batchSize == null || $onlyCount) {
// we need to include referrals here as a referral can occur w/o there being an encounter
$rez = sqlStatementCdrEngine($sql, array($provider, $provider, $provider));
if ($onlyCount) {
$patientNumber = sqlNumRows($rez);
}
} else {
//batching
$sql .= " LIMIT " . intval($start) - 1 . "," . intval($batchSize);
$rez = sqlStatementCdrEngine($sql, array($provider, $provider, $provider));
}
} else { //$pat_prov_rel == 'primary'
// Choose patients that are assigned to the specific physician (primary physician in patient demographics)
if ($start == null || $batchSize == null || $onlyCount) {
$rez = sqlStatementCdrEngine("SELECT `pid` FROM `patient_data` " .
"WHERE `providerID`=? ORDER BY `pid`", array($provider));
if ($onlyCount) {
$patientNumber = sqlNumRows($rez);
}
} else {
$rez = sqlStatementCdrEngine("SELECT `pid` FROM `patient_data` " .
"WHERE `providerID`=? ORDER BY `pid` LIMIT ?,?", array($provider,($start - 1),$batchSize));
}
}
}
// convert the sql query results into an array if returning the array
if (!$onlyCount) {
for ($iter = 0; $row = sqlFetchArray($rez); $iter++) {
$patientData[$iter] = $row;
}
}
}
if ($onlyCount) {
// return the number of applicable patients
return $patientNumber;
} else {
// return array of patient pids
return $patientData;
}
}
/**
* Process patient array that is to be tested. This uses the patient relationship context of encounters linked to billing facilities
*
* @param integer $start applicable patient to start at (when batching process)
* @param integer $batchSize number of patients to batch (when batching process)
* @param boolean $onlyCount If true, then will just return the total number of applicable records (ignores batching parameters)
* @param integer $billing_facility id of the billing facility to constrain patient relationships to, if NULL it uses ALL billing facilities
* @param integer|null $provider_id The id of a provider to restrict patient data to if we have one
* @return array/integer Array of patient pid values or number total pertinent patients (if $onlyCount is TRUE)
*/
function buildPatientArrayEncounterBillingFacility($start, $batchSize, $onlyCount, $billing_facility, $provider_id = null)
{
$sql = "SELECT DISTINCT `pid` FROM `form_encounter` ";
$binds = [];
$billing_facility = intval($billing_facility); // make sure its an integer
if (empty($billing_facility)) {
$sql .= "WHERE `form_encounter`.`billing_facility` IS NOT NULL ";
} else {
// " WHERE (`provider_id`=? OR `supervisor_id`=?) AND `billing_facility` = ? ORDER BY `pid`", array($provider,$provider, $billing_facility));
$sql .= " WHERE `form_encounter`.`billing_facility` = ? ";
$binds[] = $billing_facility;
}
if (!empty($provider_id)) {
$provider_id = intval($provider_id); // make sure we convert this to a pure int
$sql .= " AND (`form_encounter`.`provider_id` = ? OR `form_encounter`.`supervisor_id` = ?)";
$binds[] = $provider_id;
$binds[] = $provider_id;
}
$sql .= "UNION SELECT DISTINCT `transactions`.`pid` FROM `transactions` ";
$sql .= "INNER JOIN `lbt_data` ON `lbt_data`.`form_id` = `transactions`.`id` AND `lbt_data`.`field_id` = 'billing_facility_id' ";
$sql .= "INNER JOIN lbt_data lbt_data2 ON lbt_data.form_id = transactions.id AND lbt_data2.field_id = 'refer_from' ";
if (!empty($billing_facility)) {
$sql .= " WHERE `lbt_data`.`field_value` = ? ";
$binds[] = $billing_facility;
}
if (!empty($provider_id)) {
$sql .= " AND `lbt_data2`.`field_value` = ? ";
$binds[] = $provider_id;
}
$sql .= "ORDER BY `pid`";
if (!($start == null || $batchSize == null || $onlyCount)) {
$sql .= "LIMIT " . (intval($start) - 1) . "," . intval($batchSize);
}
$rez = sqlStatementCdrEngine($sql, $binds);
if ($onlyCount) {
$patientNumber = sqlNumRows($rez);
return $patientNumber;
}
$patientData = [];
for ($iter = 0; $row = sqlFetchArray($rez); $iter++) {
$patientData[$iter] = $row;
}
return $patientData;
}
/**
* Process patient array that is to be tested. This uses the patient relationship context of the primary provider who is
* linked to a billing facility
*
* @param integer $start applicable patient to start at (when batching process)
* @param integer $batchSize number of patients to batch (when batching process)
* @param boolean $onlyCount If true, then will just return the total number of applicable records (ignores batching parameters)
* @param integer $billing_facility id of the billing facility to constrain patient relationships to, if NULL it uses ALL billing facilities
* @param integer|null $provider_id The id of a provider to restrict patient data to if we have one
* @return array/integer Array of patient pid values or number total pertinent patients (if $onlyCount is TRUE)
*/
function buildPatientArrayPrimaryProviderBillingFacility($start, $batchSize, $onlyCount, $billing_facility, $provider_id = null)
{
$sql = "SELECT DISTINCT `pid` FROM `patient_data` JOIN users providers ON `patient_data`.`providerID`=providers.id ";
$binds = [];
$billing_facility = intval($billing_facility); // make sure its an integer
if (empty($billing_facility)) {
$sql .= "WHERE (`providers`.`billing_facility_id` IS NOT NULL)";
} else {
$sql .= " WHERE (`providers`.`billing_facility_id`=?)";
$binds[] = $billing_facility;
}
if (!empty($provider_id)) {
$sql .= " AND `providers.id`=?";
$binds[] = $provider_id;
}
$sql .= "UNION SELECT DISTINCT `transactions`.`pid` FROM `transactions` ";
$sql .= "INNER JOIN lbt_data ON lbt_data.form_id = transactions.id AND lbt_data.field_id = 'refer_from' ";
$sql .= "INNER JOIN `users` providers ON `lbt_data`.`form_id` = `transactions`.`id` AND `lbt_data`.`form_value` = providers.id ";
if (empty($billing_facility)) {
$sql .= "WHERE (`providers`.`billing_facility_id` IS NOT NULL)";
} else {
$sql .= " WHERE (`providers`.`billing_facility_id`=?)";
$binds[] = $billing_facility;
}
if (!empty($provider_id)) {
$sql .= " AND `providers.id`=?";
$binds[] = $provider_id;
}
$sql .= "ORDER BY `pid`";
if (!($start == null || $batchSize == null || $onlyCount)) {
$sql .= "LIMIT " . (intval($start) - 1) . "," . intval($batchSize);
}
$rez = sqlStatementCdrEngine($sql, $binds);
if ($onlyCount) {
$patientNumber = sqlNumRows($rez);
return $patientNumber;
}
$patientData = [];
for ($iter = 0; $row = sqlFetchArray($rez); $iter++) {
$patientData[$iter] = $row;
}
return $patientData;
}
/**
* Test filter of a selected rule on a selected patient
*
* @param integer $patient_id pid of selected patient.
* @param string $rule id(string) of selected rule
* @param string $dateTarget target date (format Y-m-d H:i:s). If blank then will test with current date as target.
* @return boolean/string if pass filter then TRUE; if excluded then 'EXCLUDED'; if not pass filter then FALSE
*/
function test_filter($patient_id, $rule, $dateTarget)
{
// Set date to current if not set
$dateTarget = ($dateTarget) ? $dateTarget : date('Y-m-d H:i:s');
// Collect patient information
$patientData = getPatientData($patient_id, "sex, DATE_FORMAT(DOB,'%Y %m %d') as DOB_TS");
//
// ----------------- INCLUSIONS -----------------
//
// -------- Age Filter (inclusion) ------------
// Calculate patient age in years and months
$patientAgeYears = convertDobtoAgeYearDecimal($patientData['DOB_TS'], $dateTarget);
$patientAgeMonths = convertDobtoAgeMonthDecimal($patientData['DOB_TS'], $dateTarget);
// Min age (year) Filter (assume that there in not more than one of each)
$filter = resolve_filter_sql($rule, 'filt_age_min');
if (!empty($filter)) {
$row = $filter[0];
if ($row ['method_detail'] == "year") {
if ($row['value'] && ($row['value'] > $patientAgeYears)) {
return false;
}
}
if ($row ['method_detail'] == "month") {
if ($row['value'] && ($row['value'] > $patientAgeMonths)) {
return false;
}
}
}
// Max age (year) Filter (assume that there in not more than one of each)
$filter = resolve_filter_sql($rule, 'filt_age_max');
if (!empty($filter)) {
$row = $filter[0];
if ($row ['method_detail'] == "year") {
if ($row['value'] && ($row['value'] < $patientAgeYears)) {
return false;
}
}
if ($row ['method_detail'] == "month") {
if ($row['value'] && ($row['value'] < $patientAgeMonths)) {
return false;
}
}
}
// -------- Gender Filter (inclusion) ---------
// Gender Filter (assume that there in not more than one of each)
$filter = resolve_filter_sql($rule, 'filt_sex');
if (!empty($filter)) {
$row = $filter[0];
if ($row['value'] && ($row['value'] != $patientData['sex'])) {
return false;
}
}
// -------- Database Filter (inclusion) ------
// Database Filter
$filter = resolve_filter_sql($rule, 'filt_database');
if ((!empty($filter)) && !database_check($patient_id, $filter, '', $dateTarget)) {
return false;
}
// -------- Lists Filter (inclusion) ----
// Set up lists filter, which is fully customizable and currently includes diagnoses, meds,
// surgeries and allergies.
$filter = resolve_filter_sql($rule, 'filt_lists');
if ((!empty($filter)) && !lists_check($patient_id, $filter, $dateTarget)) {
return false;
}
// -------- Procedure (labs,imaging,test,procedures,etc) Filter (inlcusion) ----
// Procedure Target (includes) (may need to include an interval in the future)
$filter = resolve_filter_sql($rule, 'filt_proc');
if ((!empty($filter)) && !procedure_check($patient_id, $filter, '', $dateTarget)) {
return false;
}
//
// ----------------- EXCLUSIONS -----------------
//
// -------- Lists Filter (EXCLUSION) ----
// Set up lists EXCLUSION filter, which is fully customizable and currently includes diagnoses, meds,
// surgeries and allergies.
$filter = resolve_filter_sql($rule, 'filt_lists', 0);
if ((!empty($filter)) && lists_check($patient_id, $filter, $dateTarget)) {
return "EXCLUDED";
}
// Passed all filters, so return true.
return true;
}
/**
* Return an array containing existing group ids for a rule
*
* @param string $rule id(string) of rule
* @return array listing of group ids
*/
function returnTargetGroups($rule)
{
$sql = sqlStatementCdrEngine("SELECT DISTINCT `group_id` FROM `rule_target` " .
"WHERE `id`=?", array($rule));
$groups = array();
for ($iter = 0; $row = sqlFetchArray($sql); $iter++) {
$groups[] = $row['group_id'];
}
return $groups;
}
/**
* Test targets of a selected rule on a selected patient
*
* @param integer $patient_id pid of selected patient.
* @param string $rule id(string) of selected rule (if blank, then will ignore grouping)
* @param integer $group_id group id of target group
* @param string $dateTarget target date (format Y-m-d H:i:s).
* @return boolean if target passes then true, otherwise false
*/
function test_targets($patient_id, $rule, string $group_id = null, $dateTarget = null)
{
// -------- Interval Target ----
$interval = resolve_target_sql($rule, $group_id, 'target_interval');
// -------- Database Target ----
// Database Target (includes)
$target = resolve_target_sql($rule, $group_id, 'target_database');
if ((!empty($target)) && !database_check($patient_id, $target, $interval, $dateTarget)) {
return false;
}
// -------- Procedure (labs,imaging,test,procedures,etc) Target ----
// Procedure Target (includes)
$target = resolve_target_sql($rule, $group_id, 'target_proc');
if ((!empty($target)) && !procedure_check($patient_id, $target, $interval, $dateTarget)) {
return false;
}
// -------- Appointment Target ----
// Appointment Target (includes) (Specialized functionality for appointment reminders)
$target = resolve_target_sql($rule, $group_id, 'target_appt');
return !((!empty($target)) && appointment_check($patient_id, $dateTarget));
}
/**
* Function to return active plans
*
* @param string $type plan type filter (normal or cqm or blank)
* @param integer $patient_id pid of selected patient. (if custom plan does not exist then will use the default plan)
* @param boolean $configurableOnly true if only want the configurable (per patient) plans (ie. ignore cqm plans)
* @return array active plans
*/
function resolve_plans_sql($type = '', $patient_id = '0', $configurableOnly = false)
{
if ($configurableOnly) {
// Collect all default, configurable (per patient) plans into an array
// (ie. ignore the cqm rules)
$sql = sqlStatementCdrEngine("SELECT * FROM `clinical_plans` WHERE `pid`=0 AND `cqm_flag` !=1 ORDER BY `id`");
} else {
// Collect all default plans into an array
$sql = sqlStatementCdrEngine("SELECT * FROM `clinical_plans` WHERE `pid`=0 ORDER BY `id`");
}
$returnArray = array();
for ($iter = 0; $row = sqlFetchArray($sql); $iter++) {
$returnArray[] = $row;
}
// Now collect the pertinent plans
$newReturnArray = array();
// Need to select rules (use custom if exist)
foreach ($returnArray as $plan) {
$customPlan = sqlQueryCdrEngine("SELECT * FROM `clinical_plans` WHERE `id`=? AND `pid`=?", array($plan['id'],$patient_id));
// Decide if use default vs custom plan (preference given to custom plan)
if (!empty($customPlan)) {
if ($type == "cqm") {
// For CQM , do not use custom plans (these are to create standard clinic wide reports)
$goPlan = $plan;
} else {
// merge the custom plan with the default plan
$mergedPlan = array();
foreach ($customPlan as $key => $value) {
if ($value == null && preg_match("/_flag$/", $key)) {
// use default setting
$mergedPlan[$key] = $plan[$key];
} else {
// use custom setting
$mergedPlan[$key] = $value;
}
}
$goPlan = $mergedPlan;
}
} else {
$goPlan = $plan;
}
// Use the chosen plan if set
if (!empty($type)) {
if ($goPlan["${type}_flag"] == 1) {
// active, so use the plan
$newReturnArray[] = $goPlan;
}
} else {
if (
$goPlan['normal_flag'] == 1 ||
$goPlan['cqm_flag'] == 1
) {
// active, so use the plan
$newReturnArray[] = $goPlan;
}
}
}
$returnArray = $newReturnArray;
return $returnArray;
}
/**
* Function to return a specific plan
*
* @param string $plan id(string) of plan
* @param integer $patient_id pid of selected patient. (if set to 0, then will return the default rule).
* @return array a plan
*/
function collect_plan($plan, $patient_id = '0')
{
return sqlQueryCdrEngine("SELECT * FROM `clinical_plans` WHERE `id`=? AND `pid`=?", array($plan,$patient_id));
}
/**
* Function to set a specific plan activity for a specific patient
*
* @param string $plan id(string) of plan
* @param string $type plan filter (normal,cqm)
* @param string $setting activity of plan (yes,no,default)
* @param integer $patient_id pid of selected patient.
*/
function set_plan_activity_patient($plan, $type, $setting, $patient_id)
{
// Don't allow messing with the default plans here
if ($patient_id == "0") {
return;
}
// Convert setting
if ($setting == "on") {
$setting = 1;
} elseif ($setting == "off") {
$setting = 0;
} else { // $setting == "default"
$setting = null;
}
// Collect patient specific plan, if already exists.
$query = "SELECT * FROM `clinical_plans` WHERE `id` = ? AND `pid` = ?";
$patient_plan = sqlQueryCdrEngine($query, array($plan,$patient_id));
if (empty($patient_plan)) {
// Create a new patient specific plan with flags all set to default
$query = "INSERT into `clinical_plans` (`id`, `pid`) VALUES (?,?)";
sqlStatementCdrEngine($query, array($plan, $patient_id));
}
// Update patient specific row
$query = "UPDATE `clinical_plans` SET `" . escape_sql_column_name($type . "_flag", array("clinical_plans")) . "`= ? WHERE id = ? AND pid = ?";
sqlStatementCdrEngine($query, array($setting,$plan,$patient_id));
}
/**
* Function to return active rules
*
* @param string $type rule filter (active_alert,passive_alert,cqm,cqm_2011,cqm_2014,amc_2011,amc_2014,patient_reminder)
* @param integer $patient_id pid of selected patient. (if custom rule does not exist then will use the default rule)
* @param boolean $configurableOnly true if only want the configurable (per patient) rules (ie. ignore cqm and amc rules)
* @param string $plan collect rules for specific plan
* @param string $user If a user is set, then will only show rules that user has permission to see
* @return array rules
*/
function resolve_rules_sql($type = '', $patient_id = '0', $configurableOnly = false, $plan = '', $user = '')
{
if ($configurableOnly) {
// Collect all default, configurable (per patient) rules into an array
// (ie. ignore the cqm and amc rules)
$sql = sqlStatementCdrEngine("SELECT * FROM `clinical_rules` WHERE `pid`=0 AND `cqm_flag` !=1 AND `amc_flag` !=1 ORDER BY `id`");
} else {
// Collect all default rules into an array
$sql = sqlStatementCdrEngine("SELECT * FROM `clinical_rules` WHERE `pid`=0 ORDER BY `id`");
}
$returnArray = array();
for ($iter = 0; $row = sqlFetchArray($sql); $iter++) {
$returnArray[] = $row;
}
// Now filter rules for plan (if applicable)
if (!empty($plan)) {
$planReturnArray = array();
foreach ($returnArray as $rule) {
$standardRule = sqlQueryCdrEngine("SELECT * FROM `clinical_plans_rules` " .
"WHERE `plan_id`=? AND `rule_id`=?", array($plan,$rule['id']));
if (!empty($standardRule)) {
$planReturnArray[] = $rule;
}
}
$returnArray = $planReturnArray;
}
// Now collect the pertinent rules
$newReturnArray = array();
// Need to select rules (use custom if exist)
foreach ($returnArray as $rule) {
// If user is set, then check if user has access to the rule
if (!empty($user)) {
$access_control = explode(':', $rule['access_control']);
if (!empty($access_control[0]) && !empty($access_control[1])) {
// Section and ACO filters are not empty, so do the test for access.
if (!AclMain::aclCheckCore($access_control[0], $access_control[1], $user)) {
// User does not have access to this rule, so skip the rule.
continue;
}
} else {
// Section or ACO filters are empty, so use default patients:med aco
if (!AclMain::aclCheckCore('patients', 'med', $user)) {
// User does not have access to this rule, so skip the rule.
continue;
}
}
}
$customRule = sqlQueryCdrEngine("SELECT * FROM `clinical_rules` WHERE `id`=? AND `pid`=?", array($rule['id'],$patient_id));
// Decide if use default vs custom rule (preference given to custom rule)
if (!empty($customRule)) {
if ($type == "cqm" || CertificationReportTypes::isAMCReportType($type)) {
// For CQM and AMC, do not use custom rules (these are to create standard clinic wide reports)
$goRule = $rule;
} else {
// merge the custom rule with the default rule
$mergedRule = array();
foreach ($customRule as $key => $value) {
if ($value == null && preg_match("/_flag$/", $key)) {
// use default setting
$mergedRule[$key] = $rule[$key];
} else {
// use custom setting
$mergedRule[$key] = $value;
}
}
$goRule = $mergedRule;
}
} else {
$goRule = $rule;
}
// Use the chosen rule if set
if (!empty($type)) {
if ($goRule["${type}_flag"] == 1) {
// active, so use the rule
$newReturnArray[] = $goRule;
}
} else {
// no filter, so return the rule
$newReturnArray[] = $goRule;
}
}
$returnArray = $newReturnArray;
return $returnArray;
}
/**
* Function to return a specific rule
*
* @param string $rule id(string) of rule
* @param integer $patient_id pid of selected patient. (if set to 0, then will return the default rule).
* @return array rule
*/
function collect_rule($rule, $patient_id = '0')
{
return sqlQueryCdrEngine("SELECT * FROM `clinical_rules` WHERE `id`=? AND `pid`=?", array($rule,$patient_id));
}
/**
* Function to set a specific rule activity for a specific patient
*
* @param string $rule id(string) of rule
* @param string $type rule filter (active_alert,passive_alert,cqm,amc,patient_reminder)
* @param string $setting activity of rule (yes,no,default)
* @param integer $patient_id pid of selected patient.
*/
function set_rule_activity_patient($rule, $type, $setting, $patient_id)
{
// Don't allow messing with the default rules here
if ($patient_id == "0") {
return;
}
// Convert setting
if ($setting == "on") {
$setting = 1;
} elseif ($setting == "off") {
$setting = 0;
} else { // $setting == "default"
$setting = null;
}
//Collect main rule to allow setting of the access_control
$original_query = "SELECT * FROM `clinical_rules` WHERE `id` = ? AND `pid` = 0";
$patient_rule_original = sqlQueryCdrEngine($original_query, array($rule));
// Collect patient specific rule, if already exists.
$query = "SELECT * FROM `clinical_rules` WHERE `id` = ? AND `pid` = ?";
$patient_rule = sqlQueryCdrEngine($query, array($rule,$patient_id));
if (empty($patient_rule)) {
// Create a new patient specific rule with flags all set to default
$query = "INSERT into `clinical_rules` (`id`, `pid`, `access_control`) VALUES (?,?,?)";
sqlStatementCdrEngine($query, array($rule, $patient_id, $patient_rule_original['access_control']));
}
// Update patient specific row
$query = "UPDATE `clinical_rules` SET `" . escape_sql_column_name($type . "_flag", ["clinical_rules"]) . "`= ?, `access_control` = ? WHERE id = ? AND pid = ?";
sqlStatementCdrEngine($query, array($setting,$patient_rule_original['access_control'],$rule,$patient_id));
}
/**
* Function to return applicable reminder dates (relative)
*
* @param string $rule id(string) of selected rule
* @param string $reminder_method string label of filter type
* @return array reminder features
*/
function resolve_reminder_sql($rule, $reminder_method)
{
$sql = sqlStatementCdrEngine("SELECT `method_detail`, `value` FROM `rule_reminder` " .
"WHERE `id`=? AND `method`=?", array($rule, $reminder_method));
$returnArray = array();
for ($iter = 0; $row = sqlFetchArray($sql); $iter++) {
$returnArray[] = $row;
}
return $returnArray;
}
/**
* Function to return applicable filters
*
* @param string $rule id(string) of selected rule
* @param string $filter_method string label of filter type
* @param string $include_flag to allow selection for included or excluded filters
* @return array filters
*/
function resolve_filter_sql($rule, $filter_method, $include_flag = 1)
{
$sql = sqlStatementCdrEngine("SELECT `method_detail`, `value`, `required_flag` FROM `rule_filter` " .
"WHERE `id`=? AND `method`=? AND `include_flag`=?", array($rule, $filter_method, $include_flag));
$returnArray = array();
for ($iter = 0; $row = sqlFetchArray($sql); $iter++) {
$returnArray[] = $row;
}
return $returnArray;
}
/**
* Function to return applicable targets
*
* @param string $rule id(string) of selected rule
* @param integer $group_id group id of target group (if blank, then will ignore grouping)
* @param string $target_method string label of target type
* @param string $include_flag to allow selection for included or excluded targets
* @return array targets
*/
function resolve_target_sql($rule, string $group_id = null, $target_method = '', $include_flag = 1)
{
if ($group_id) {
$sql = sqlStatementCdrEngine("SELECT `value`, `required_flag`, `interval` FROM `rule_target` " .
"WHERE `id`=? AND `group_id`=? AND `method`=? AND `include_flag`=?", array($rule, $group_id, $target_method, $include_flag));
} else {
$sql = sqlStatementCdrEngine("SELECT `value`, `required_flag`, `interval` FROM `rule_target` " .
"WHERE `id`=? AND `method`=? AND `include_flag`=?", array($rule, $target_method, $include_flag));
}
$returnArray = array();
for ($iter = 0; $row = sqlFetchArray($sql); $iter++) {
$returnArray[] = $row;
}
return $returnArray;
}
/**
* Function to return applicable actions
*
* @param string $rule id(string) of selected rule
* @param integer $group_id group id of target group (if blank, then will ignore grouping)
* @return array actions
*/
function resolve_action_sql($rule, $group_id = '')
{
if ($group_id) {
$sql = sqlStatementCdrEngine("SELECT b.category, b.item, b.clin_rem_link, b.reminder_message, b.custom_flag " .
"FROM `rule_action` as a " .
"JOIN `rule_action_item` as b " .
"ON a.category = b.category AND a.item = b.item " .
"WHERE a.id=? AND a.group_id=?", array($rule,$group_id));
} else {
$sql = sqlStatementCdrEngine("SELECT b.category, b.item, b.value, b.custom_flag " .
"FROM `rule_action` as a " .
"JOIN `rule_action_item` as b " .
"ON a.category = b.category AND a.item = b.item " .
"WHERE a.id=?", array($rule));
}
$returnArray = array();
for ($iter = 0; $row = sqlFetchArray($sql); $iter++) {
$returnArray[] = $row;
}
return $returnArray;
}
/**
* Function to check database filters and targets
*
* @param string $patient_id pid of selected patient.
* @param array $filter array containing filter/target elements
* @param array $interval array containing interval elements
* @param string $dateTarget target date(format Y-m-d H:i:s). blank is current date.
* @return boolean true if check passed, otherwise false
*/
function database_check($patient_id, $filter, $interval = '', $dateTarget = '')
{
$isMatch = false; //matching flag
// Set date to current if not set
$dateTarget = ($dateTarget) ? $dateTarget : date('Y-m-d H:i:s');
// Unpackage interval information
// (Assume only one for now and only pertinent for targets)
$intervalType = '';
$intervalValue = '';
if (!empty($interval)) {
$intervalType = $interval[0]['value'];
$intervalValue = $interval[0]['interval'];
}
$cond_loop = 0;
foreach ($filter as $row) {
// Row description
// [0]=>special modes
$temp_df = explode("::", $row['value']);
if ($temp_df[0] == "CUSTOM") {
// Row description
// [0]=>special modes(CUSTOM) [1]=>category [2]=>item [3]=>complete? [4]=>number of hits comparison [5]=>number of hits
if (exist_custom_item($patient_id, $temp_df[1], $temp_df[2], $temp_df[3], $temp_df[4], $temp_df[5], $intervalType, $intervalValue, $dateTarget)) {
// Record the match
$isMatch = true;
} else {
// If this is a required entry then return false
if ($row['required_flag']) {
return false;
}
}
} elseif ($temp_df[0] == "LIFESTYLE") {
// Row description
// [0]=>special modes(LIFESTYLE) [1]=>column [2]=>status
if (exist_lifestyle_item($patient_id, $temp_df[1], $temp_df[2], $dateTarget)) {
// Record the match
$isMatch = true;
} else {
// If this is a required entry then return false
if ($row['required_flag']) {
return false;
}
}
} else {
// Default mode
// Row description
// [0]=>special modes(BLANK) [1]=>table [2]=>column [3]=>value comparison [4]=>value [5]=>number of hits comparison [6]=>number of hits
if (exist_database_item($patient_id, $temp_df[1], $temp_df[2], $temp_df[3], $temp_df[4], $temp_df[5], $temp_df[6], $intervalType, $intervalValue, $dateTarget)) {
// Record the match
if ($cond_loop > 0) { // For multiple condition check
$isMatch = $isMatch && 1;
} else {
$isMatch = true;
}
} else {
// If this is a required entry then return false
if ($row['required_flag']) {
return false;
}
}
}
$cond_loop++;
}
// return results of check
return $isMatch;
}
/**
* Function to check procedure filters and targets
*
* @param string $patient_id pid of selected patient.
* @param array $filter array containing filter/target elements
* @param array $interval array containing interval elements
* @param string $dateTarget target date(format Y-m-d H:i:s). blank is current date.
* @return boolean true if check passed, otherwise false
*/
function procedure_check($patient_id, $filter, $interval = '', $dateTarget = '')
{
$isMatch = false; //matching flag
// Set date to current if not set
$dateTarget = ($dateTarget) ? $dateTarget : date('Y-m-d H:i:s');
// Unpackage interval information
// (Assume only one for now and only pertinent for targets)
$intervalType = '';
$intervalValue = '';
if (!empty($interval)) {
$intervalType = $interval[0]['value'];
$intervalValue = $interval[0]['interval'];
}
foreach ($filter as $row) {
// Row description
// [0]=>title [1]=>code [2]=>value comparison [3]=>value [4]=>number of hits comparison [5]=>number of hits
// code description
// <type(ICD9,CPT4)>:<identifier>||<type(ICD9,CPT4)>:<identifier>||<identifier> etc.
$temp_df = explode("::", $row['value']);
if (exist_procedure_item($patient_id, $temp_df[0], $temp_df[1], $temp_df[2], $temp_df[3], $temp_df[4], $temp_df[5], $intervalType, $intervalValue, $dateTarget)) {
// Record the match
$isMatch = true;
} else {
// If this is a required entry then return false
if ($row['required_flag']) {
return false;
}
}
}
// return results of check
return $isMatch;
}
/**
* Function to check for appointment
*
* @todo Complete this to allow appointment reminders.
* @param string $patient_id pid of selected patient.
* @param string $dateTarget target date(format Y-m-d H:i:s). blank is current date.
* @return boolean true if appt exist, otherwise false
*/
function appointment_check($patient_id, $dateTarget = '')
{
$isMatch = false; //matching flag
// Set date to current if not set (although should always be set)
$dateTarget = ($dateTarget) ? $dateTarget : date('Y-m-d H:i:s');
$dateTargetRound = date('Y-m-d', $dateTarget);
// Set current date
$currentDate = date('Y-m-d H:i:s');
// Basically, if the appointment is within the current date to the target date,
// then return true. (will not send reminders on same day as appointment)
$sql = sqlStatementCdrEngine("SELECT openemr_postcalendar_events.pc_eid, " .
"openemr_postcalendar_events.pc_title, " .
"openemr_postcalendar_events.pc_eventDate, " .
"openemr_postcalendar_events.pc_startTime, " .
"openemr_postcalendar_events.pc_endTime " .
"FROM openemr_postcalendar_events " .
"WHERE openemr_postcalendar_events.pc_eventDate > ? " .
"AND openemr_postcalendar_events.pc_eventDate <= ? " .
"AND openemr_postcalendar_events.pc_pid = ?", array($currentDate,$dateTarget,$patient_id));
// return results of check
//
// TODO: Figure out how to have multiple appointment and changing appointment reminders.
// Plan to send back array of appt info (eid, time, date, etc.)
// to do this.
if (sqlNumRows($sql) > 0) {
$isMatch = true;
}
return $isMatch;
}
/**
* Function to check lists filters and targets. Customizable and currently includes diagnoses, medications, allergies and surgeries.
*
* @param string $patient_id pid of selected patient.
* @param array $filter array containing lists filter/target elements
* @param string $dateTarget target date(format Y-m-d H:i:s). blank is current date.
* @return boolean true if check passed, otherwise false
*/
function lists_check($patient_id, $filter, $dateTarget)
{
$isMatch = false; //matching flag
// Set date to current if not set
$dateTarget = ($dateTarget) ? $dateTarget : date('Y-m-d H:i:s');
foreach ($filter as $row) {
if (exist_lists_item($patient_id, $row['method_detail'], $row['value'], $dateTarget)) {
// Record the match
$isMatch = true;
} else {
// If this is a required entry then return false
if ($row['required_flag']) {
return false;
}
}
}
// return results of check
return $isMatch;
}
/**
* Function to check for existance of data in database for a patient
*
* @param string $patient_id pid of selected patient.
* @param string $table selected mysql table
* @param string $column selected mysql column
* @param string $data_comp data comparison (eq,ne,gt,ge,lt,le)
* @param string $data selected data in the mysql database (1)(2)
* @param string $num_items_comp number items comparison (eq,ne,gt,ge,lt,le)
* @param integer $num_items_thres number of items threshold
* @param string $intervalType type of interval (ie. year)
* @param integer $intervalValue searched for within this many times of the interval type
* @param string $dateTarget target date(format Y-m-d H:i:s).
* @return boolean true if check passed, otherwise false
*
* (1) If data ends with **, operators ne/eq are replaced by (NOT)LIKE operators
* (2) If $data contains '#CURDATE#', then it will be converted to the current date.
*
*/
function exist_database_item($patient_id, $table, string $column = null, $data_comp = '', string $data = null, $num_items_comp = null, $num_items_thres = null, $intervalType = '', $intervalValue = '', $dateTarget = '')
{
// Set date to current if not set
$dateTarget = ($dateTarget) ? $dateTarget : date('Y-m-d H:i:s');
// Collect the correct column label for patient id in the table
$patient_id_label = collect_database_label('pid', $table);
// Get the interval sql query string
$dateSql = sql_interval_string($table, $intervalType, $intervalValue, $dateTarget);
// If just checking for existence (ie. data is empty),
// then simply set the comparison operator to ne.
if (empty($data)) {
$data_comp = "ne";
}
// get the appropriate sql comparison operator
$compSql = convertCompSql($data_comp);
// custom issues per table can be placed here
$customSQL = '';
if ($table == 'immunizations') {
$customSQL = " AND `added_erroneously` = '0' ";
}
//adding table list for where condition
$whereTables = '';
if ($table == 'procedure_result') {
$whereTables = ", procedure_order_code, " .
"procedure_order, " .
"procedure_report " ;
$customSQL = " AND procedure_order.procedure_order_id = procedure_order_code.procedure_order_id AND " .
"procedure_report.procedure_order_id = procedure_order.procedure_order_id AND " .
"procedure_report.procedure_order_seq = procedure_order_code.procedure_order_seq AND " .
"procedure_result.procedure_report_id = procedure_report.procedure_report_id ";
}
// check for items
if (empty($column)) {
// simple search for any table entries
$sql = sqlStatementCdrEngine("SELECT * " .
"FROM `" . escape_table_name($table) . "` " .
" " . $whereTables . " " .
"WHERE " . add_escape_custom($patient_id_label) . "=? " . $customSQL, array($patient_id));
} else {
// mdsupport : Allow trailing '**' in the strings to perform LIKE searches
if ((substr($data, -2) == '**') && (($compSql == "=") || ($compSql == "!="))) {
$compSql = ($compSql == "!=" ? " NOT" : "") . " LIKE CONCAT('%',?,'%') ";
$data = substr_replace($data, '', -2);
} else {
$compSql = $compSql . "? ";
}
if ($whereTables == "" && strpos($table, 'form_') !== false) {
//To handle standard forms starting with form_
//In this case, we are assuming the date field is "date"
$sql = sqlStatementCdrEngine(
"SELECT b.`" . escape_sql_column_name($column, [$table]) . "` " .
"FROM forms a " .
"LEFT JOIN `" . escape_table_name($table) . "` " . " b " .
"ON (a.form_id=b.id AND a.formdir LIKE '" . add_escape_custom(substr($table, 5)) . "') " .
"WHERE a.deleted != '1' " .
"AND b.`" . escape_sql_column_name($column, [$table]) . "`" . $compSql .
"AND b." . add_escape_custom($patient_id_label) . "=? " . $customSQL
. str_replace("`date`", "b.`date`", $dateSql),
array($data, $patient_id)
);
} else {
// This allows to enter the wild card #CURDATE# in the CDR Demographics filter criteria at the value field
// #CURDATE# is replace by the Current date allowing a dynamic date filtering
if ($data == '#CURDATE#') {
$data = date("Y-m-d");
}
// search for number of specific items
$sql = sqlStatementCdrEngine("SELECT `" . escape_sql_column_name($column, [$table]) . "` " .
"FROM `" . escape_table_name($table) . "` " .
" " . $whereTables . " " .
"WHERE `" . escape_sql_column_name($column, [$table]) . "`" . $compSql .
"AND " . add_escape_custom($patient_id_label) . "=? " . $customSQL .
$dateSql, array($data, $patient_id));
}
}
// See if number of returned items passes the comparison
return itemsNumberCompare($num_items_comp, $num_items_thres, sqlNumRows($sql));
}
/**
* Function to check for existence of procedure(s) for a patient
*
* @param string $patient_id pid of selected patient.
* @param string $proc_title procedure title
* @param string $proc_code procedure identifier code (array of <type(ICD9,CPT4)>:<identifier>||<type(ICD9,CPT4)>:<identifier>||<identifier> etc.)
* @param string $results_comp results comparison (eq,ne,gt,ge,lt,le)
* @param string $result_data results data (1)
* @param string $num_items_comp number items comparison (eq,ne,gt,ge,lt,le)
* @param integer $num_items_thres number of items threshold
* @param string $intervalType type of interval (ie. year)
* @param integer $intervalValue searched for within this many times of the interval type
* @param string $dateTarget target date(format Y-m-d H:i:s).
* @return boolean true if check passed, otherwise false
*
* (1) If result_data ends with **, operators ne/eq are replaced by (NOT)LIKE operators
*
*/
function exist_procedure_item($patient_id, $proc_title, $proc_code, $result_comp, string $result_data = null, $num_items_comp = null, $num_items_thres = null, $intervalType = '', $intervalValue = '', $dateTarget = '')
{
// Set date to current if not set
$dateTarget = ($dateTarget) ? $dateTarget : date('Y-m-d H:i:s');
// Set the table exception (for looking up pertinent date and pid sql columns)
$table = "PROCEDURE-EXCEPTION";
// Collect the correct column label for patient id in the table
$patient_id_label = collect_database_label('pid', $table);
// Get the interval sql query string
$dateSql = sql_interval_string($table, $intervalType, $intervalValue, $dateTarget);
// If just checking for existence (ie result_data is empty),
// then simply set the comparison operator to ne.
if (empty($result_data)) {
$result_comp = "ne";
}
// get the appropriate sql comparison operator
$compSql = convertCompSql($result_comp);
// explode the code array
$codes = array();
if (!empty($proc_code)) {
$codes = explode("||", $proc_code);
} else {
$codes[0] = '';
}
// ensure proc_title is at least blank
if (empty($proc_title)) {
$proc_title = '';
}
// collect specific items (use both title and/or codes) that fulfill request
$sqlBindArray = array();
$sql_query = "SELECT procedure_result.result FROM " .
"procedure_order_code, " .
"procedure_order, " .
"procedure_type, " .
"procedure_report, " .
"procedure_result " .
"WHERE " .
"procedure_order_code.procedure_code = procedure_type.procedure_code AND " .
"procedure_order.procedure_order_id = procedure_order_code.procedure_order_id AND " .
"procedure_order.lab_id = procedure_type.lab_id AND " .
"procedure_report.procedure_order_id = procedure_order.procedure_order_id AND " .
"procedure_report.procedure_order_seq = procedure_order_code.procedure_order_seq AND " .
"procedure_result.procedure_report_id = procedure_report.procedure_report_id AND " .
"procedure_type.procedure_type = 'ord' AND ";
foreach ($codes as $tem) {
$sql_query .= "( ( (procedure_type.standard_code = ? AND procedure_type.standard_code != '') " .
"OR (procedure_type.procedure_code = ? AND procedure_type.procedure_code != '') ) OR ";
array_push($sqlBindArray, $tem, $tem);
}
// mdsupport : Allow trailing '**' in the strings to perform LIKE searches
if ((substr($result_data, -2) == '**') && (($compSql == "=") || ($compSql == "!="))) {
$compSql = ($compSql == "!=" ? " NOT" : "") . " LIKE CONCAT('%',?,'%') ";
$result_data = substr_replace($result_data, '', -2);
} else {
$compSql = $compSql . "? ";
}
$sql_query .= "(procedure_type.name = ? AND procedure_type.name != '') ) " .
"AND procedure_result.result " . $compSql .
"AND " . add_escape_custom($patient_id_label) . " = ? " . $dateSql;
array_push($sqlBindArray, $proc_title, $result_data, $patient_id);
$sql = sqlStatementCdrEngine($sql_query, $sqlBindArray);
// See if number of returned items passes the comparison
return itemsNumberCompare($num_items_comp, $num_items_thres, sqlNumRows($sql));
}
/**
* Function to check for existance of data for a patient in the rule_patient_data table
*
* @param string $patient_id pid of selected patient.
* @param string $category label in category column
* @param string $item label in item column
* @param string $complete label in complete column (YES,NO, or blank)
* @param string $num_items_comp number items comparison (eq,ne,gt,ge,lt,le)
* @param integer $num_items_thres number of items threshold
* @param string $intervalType type of interval (ie. year)
* @param integer $intervalValue searched for within this many times of the interval type
* @param string $dateTarget target date(format Y-m-d H:i:s).
* @return boolean true if check passed, otherwise false
*/
function exist_custom_item($patient_id, $category, $item, $complete, $num_items_comp, $num_items_thres, string $intervalType = null, string $intervalValue = null, $dateTarget = null)
{
// Set the table
$table = 'rule_patient_data';
// Collect the correct column label for patient id in the table
$patient_id_label = collect_database_label('pid', $table);
// Get the interval sql query string
$dateSql = sql_interval_string($table, $intervalType, $intervalValue, $dateTarget);
// search for number of specific items
$sql = sqlStatementCdrEngine("SELECT `result` " .
"FROM `" . escape_table_name($table) . "` " .
"WHERE `category`=? " .
"AND `item`=? " .
"AND `complete`=? " .
"AND `" . add_escape_custom($patient_id_label) . "`=? " .
$dateSql, array($category,$item,$complete,$patient_id));
// See if number of returned items passes the comparison
return itemsNumberCompare($num_items_comp, $num_items_thres, sqlNumRows($sql));
}
/**
* Function to check for existance of data for a patient in lifestyle section
*
* @param string $patient_id pid of selected patient.
* @param string $lifestyle selected label of mysql column of patient history
* @param string $status specific status of selected lifestyle element
* @param string $dateTarget target date(format Y-m-d H:i:s). blank is current date.
* @return boolean true if check passed, otherwise false
*/
function exist_lifestyle_item($patient_id, $lifestyle, $status, $dateTarget)
{
// Set date to current if not set
$dateTarget = ($dateTarget) ? $dateTarget : date('Y-m-d H:i:s');
// Collect pertinent history data
// If illegal value in $lifestyle, then will die and report error (to prevent security vulnerabilities)
escape_sql_column_name($lifestyle, ['history_data']);
$history = getHistoryData($patient_id, $lifestyle, '', $dateTarget);
// See if match
$stringFlag = strstr(($history[$lifestyle] ?? ''), "|" . $status);
if (empty($status)) {
// Only ensuring any data has been entered into the field
$stringFlag = true;
}
return !empty($history[$lifestyle]) &&
$history[$lifestyle] != '|0|' &&
$stringFlag;
}
/**
* Function to check for lists item of a patient. Fully customizable and includes diagnoses, medications,
* allergies, and surgeries.
*
* @param string $patient_id pid of selected patient.
* @param string $type type (medical_problem, allergy, medication, etc)
* @param string $value value searching for (1)
* @param string $dateTarget target date(format Y-m-d H:i:s).
* @return boolean true if check passed, otherwise false
*
* (1) If value ends with **, operators ne/eq are replaced by (NOT)LIKE operators
*
*/
function exist_lists_item($patient_id, $type, $value, $dateTarget)
{
// Set date to current if not set
$dateTarget = ($dateTarget) ? $dateTarget : date('Y-m-d H:i:s');
// Attempt to explode the value into a code type and code (if applicable)
$value_array = explode("::", $value);
if (count($value_array) == 2) {
// Collect the code type and code
$code_type = $value_array[0];
$code = $value_array[1];
// Modify $code for both 'CUSTOM' and diagnosis searches
// Note: Diagnosis is always 'LIKE' and should not have '**'
if (substr($code, -2) == '**') {
$sqloper = " LIKE CONCAT('%',?,'%') ";
$code = substr_replace($code, '', -2);
} else {
$sqloper = "=?";
}
if ($code_type == 'CUSTOM') {
// Deal with custom code type first (title column in lists table)
$response = sqlQueryCdrEngine("SELECT * FROM `lists` " .
"WHERE `type`=? " .
"AND `pid`=? " .
"AND `title` $sqloper " .
"AND ( (`begdate` IS NULL AND `date`<=?) OR (`begdate` IS NOT NULL AND `begdate`<=?) ) " .
"AND ( (`enddate` IS NULL) OR (`enddate` IS NOT NULL AND `enddate`>=?) )", array($type,$patient_id,$code,$dateTarget,$dateTarget,$dateTarget));
if (!empty($response)) {
return true;
}
} else {
// Deal with the set code types (diagnosis column in lists table)
$response = sqlQueryCdrEngine("SELECT * FROM `lists` " .
"WHERE `type`=? " .
"AND `pid`=? " .
"AND `diagnosis` LIKE ? " .
"AND ( (`begdate` IS NULL AND `date`<=?) OR (`begdate` IS NOT NULL AND `begdate`<=?) ) " .
"AND ( (`enddate` IS NULL) OR (`enddate` IS NOT NULL AND `enddate`>=?) )", array($type,$patient_id,"%" . $code_type . ":" . $code . "%",$dateTarget,$dateTarget,$dateTarget));
if (!empty($response)) {
return true;
}
}
} else { // count($value_array) == 1
// Search the title column in lists table
// Yes, this is essentially the same as the code type listed as CUSTOM above. This provides flexibility and will ensure compatibility.
// Check for '**'
if (substr($value, -2) == '**') {
$sqloper = " LIKE CONCAT('%',?,'%') ";
$value = substr_replace($value, '', -2);
} else {
$sqloper = "=?";
}
$response = sqlQueryCdrEngine("SELECT * FROM `lists` " .
"WHERE `type`=? " .
"AND `pid`=? " .
"AND `title` $sqloper " .
"AND ( (`begdate` IS NULL AND `date`<=?) OR (`begdate` IS NOT NULL AND `begdate`<=?) ) " .
"AND ( (`enddate` IS NULL) OR (`enddate` IS NOT NULL AND `enddate`>=?) )", array($type,$patient_id,$value,$dateTarget,$dateTarget,$dateTarget));
if (!empty($response)) {
return true;
}
if ($type == 'medication') { // Special case needed for medication as it need to be looked into current medications (prescriptions table) from ccda import
$response = sqlQueryCdrEngine("SELECT * FROM `prescriptions` where `patient_id` = ? and `drug` $sqloper and `date_added` <= ?", array($patient_id,$value,$dateTarget));
if (!empty($response)) {
return true;
}
}
}
return false;
}
/**
* Function to return part of sql query to deal with interval
*
* @param string $table selected mysql table (or EXCEPTION(s))
* @param string $intervalType type of interval (ie. year)
* @param string $intervalValue searched for within this many times of the interval type
* @param string $dateTarget target date(format Y-m-d H:i:s).
* @return string contains pertinent date interval filter for mysql query
*/
function sql_interval_string($table, $intervalType, $intervalValue, $dateTarget)
{
$dateSql = "";
// Collect the correct column label for date in the table
$date_label = collect_database_label('date', $table);
// Deal with interval
if (!empty($intervalType)) {
switch ($intervalType) {
case "year":
$dateSql = "AND (" . add_escape_custom($date_label) .
" BETWEEN DATE_SUB('" . add_escape_custom($dateTarget) .
"', INTERVAL " . escape_limit($intervalValue) .
" YEAR) AND '" . add_escape_custom($dateTarget) . "') ";
break;
case "month":
$dateSql = "AND (" . add_escape_custom($date_label) .
" BETWEEN DATE_SUB('" . add_escape_custom($dateTarget) .
"', INTERVAL " . escape_limit($intervalValue) .
" MONTH) AND '" . add_escape_custom($dateTarget) . "') ";
break;
case "week":
$dateSql = "AND (" . add_escape_custom($date_label) .
" BETWEEN DATE_SUB('" . add_escape_custom($dateTarget) .
"', INTERVAL " . escape_limit($intervalValue) .
" WEEK) AND '" . add_escape_custom($dateTarget) . "') ";
break;
case "day":
$dateSql = "AND (" . add_escape_custom($date_label) .
" BETWEEN DATE_SUB('" . add_escape_custom($dateTarget) .
"', INTERVAL " . escape_limit($intervalValue) .
" DAY) AND '" . add_escape_custom($dateTarget) . "') ";
break;
case "hour":
$dateSql = "AND (" . add_escape_custom($date_label) .
" BETWEEN DATE_SUB('" . add_escape_custom($dateTarget) .
"', INTERVAL " . escape_limit($intervalValue) .
" HOUR) AND '" . add_escape_custom($dateTarget) . "') ";
break;
case "minute":
$dateSql = "AND (" . add_escape_custom($date_label) .
" BETWEEN DATE_SUB('" . add_escape_custom($dateTarget) .
"', INTERVAL " . escape_limit($intervalValue) .
" MINUTE) AND '" . add_escape_custom($dateTarget) . "') ";
break;
case "second":
$dateSql = "AND (" . add_escape_custom($date_label) .
" BETWEEN DATE_SUB('" . add_escape_custom($dateTarget) .
"', INTERVAL " . escape_limit($intervalValue) .
" SECOND) AND '" . add_escape_custom($dateTarget) . "') ";
break;
case "flu_season":
// Flu season to be hard-coded as September thru February
// (Should make this modifiable in the future)
// ($intervalValue is not used)
$dateArray = explode("-", $dateTarget);
$Year = $dateArray[0];
$dateThisYear = $Year . "-09-01";
$dateLastYear = ($Year - 1) . "-09-01";
$dateSql = " " .
"AND ((" .
"MONTH('" . add_escape_custom($dateTarget) . "') < 9 " .
"AND " . add_escape_custom($date_label) . " >= '" . $dateLastYear . "' ) " .
"OR (" .
"MONTH('" . add_escape_custom($dateTarget) . "') >= 9 " .
"AND " . add_escape_custom($date_label) . " >= '" . $dateThisYear . "' ))" .
"AND " . add_escape_custom($date_label) . " <= '" . add_escape_custom($dateTarget) . "' ";
break;
}
} else {
$dateSql = "AND " . add_escape_custom($date_label) .
" <= '" . add_escape_custom($dateTarget) . "' ";
}
// return the sql interval string
return $dateSql;
}
/**
* Function to collect generic column labels from tables. It currently works for date
* and pid. Will need to expand this as algorithm grows.
*
* @param string $label element (pid or date)
* @param string $table selected mysql table (or EXCEPTION(s))
* @return string contains official label of selected element
*/
function collect_database_label($label, $table)
{
if ($table == 'PROCEDURE-EXCEPTION') {
// return cell to get procedure collection
// special case since reuqires joing of multiple
// tables to get this value
if ($label == "pid") {
$returnedLabel = "procedure_order.patient_id";
} elseif ($label == "date") {
$returnedLabel = "procedure_report.date_collected";
} else {
// unknown label, so return the original label
$returnedLabel = $label;
}
} elseif ($table == 'immunizations') {
// return requested label for immunization table
if ($label == "pid") {
$returnedLabel = "patient_id";
} elseif ($label == "date") {
$returnedLabel = "`administered_date`";
} else {
// unknown label, so return the original label
$returnedLabel = $label;
}
} elseif ($table == 'prescriptions') {
// return requested label for prescriptions table
if ($label == "pid") {
$returnedLabel = "patient_id";
} elseif ($label == "date") {
$returnedLabel = 'date_added';
} else {
// unknown label, so return the original label
$returnedLabel = $label;
}
} elseif ($table == 'procedure_result') {
// return requested label for prescriptions table
if ($label == "pid") {
$returnedLabel = "procedure_order.patient_id";
} elseif ($label == "date") {
$returnedLabel = "procedure_report.date_collected";
} else {
// unknown label, so return the original label
$returnedLabel = $label;
}
} elseif ($table == 'openemr_postcalendar_events') {
// return requested label for prescriptions table
if ($label == "pid") {
$returnedLabel = "pc_pid";
} elseif ($label == "date") {
$returnedLabel = "pc_eventdate";
} else {
// unknown label, so return the original label
$returnedLabel = $label;
}
} else {
// return requested label for default tables
if ($label == "pid") {
$returnedLabel = "pid";
} elseif ($label == "date") {
$returnedLabel = "`date`";
} else {
// unknown label, so return the original label
$returnedLabel = $label;
}
}
return $returnedLabel;
}
/**
* Simple function to avoid processing of duplicate actions
*
* @param array $actions 2-dimensional array with all current active targets
* @param array $action array of selected target to test for duplicate
* @return boolean true if duplicate, false if not duplicate
*/
function is_duplicate_action($actions, $action)
{
foreach ($actions as $row) {
if (
$row['category'] == $action['category'] &&
$row['item'] == $action['item'] &&
$row['value'] == $action['value']
) {
// Is a duplicate
return true;
}
}
// Not a duplicate
return false;
}
/**
* Calculate the reminder dates.
*
* This function returns an array that contains three elements (each element is a date).
* <pre>The three dates are:
* first date is before the target date (past_due) (default of 1 month)
* second date is the target date (due)
* third date is after the target date (soon_due) (default of 2 weeks)
* </pre>
*
* @param string $rule id(string) of selected rule
* @param string $dateTarget target date(format Y-m-d H:i:s).
* @param string $type either 'patient_reminder' or 'clinical_reminder'
* @return array see above for description of returned array
*/
function calculate_reminder_dates($rule, string $dateTarget = null, $type = null)
{
// Set date to current if not set
$dateTarget = ($dateTarget) ? $dateTarget : date('Y-m-d H:i:s');
// Collect the current date settings (to ensure not skip)
$res = resolve_reminder_sql($rule, $type . '_current');
if (!empty($res)) {
$row = $res[0];
if ($row ['method_detail'] == "SKIP") {
$dateTarget = "SKIP";
}
}
// Collect the past_due date
$past_due_date = "";
$res = resolve_reminder_sql($rule, $type . '_post');
if (!empty($res)) {
$row = $res[0];
if ($row ['method_detail'] == "week") {
$past_due_date = date("Y-m-d H:i:s", strtotime($dateTarget . " -" . $row ['value'] . " week"));
}
if ($row ['method_detail'] == "month") {
$past_due_date = date("Y-m-d H:i:s", strtotime($dateTarget . " -" . $row ['value'] . " month"));
}
if ($row ['method_detail'] == "hour") {
$past_due_date = date("Y-m-d H:i:s", strtotime($dateTarget . " -" . $row ['value'] . " hour"));
}
if ($row ['method_detail'] == "SKIP") {
$past_due_date = "SKIP";
}
} else {
// empty settings, so use default of one month
$past_due_date = date("Y-m-d H:i:s", strtotime($dateTarget . " -1 month"));
}
// Collect the soon_due date
$soon_due_date = "";
$res = resolve_reminder_sql($rule, $type . '_pre');
if (!empty($res)) {
$row = $res[0];
if ($row ['method_detail'] == "week") {
$soon_due_date = date("Y-m-d H:i:s", strtotime($dateTarget . " +" . $row ['value'] . " week"));
}
if ($row ['method_detail'] == "month") {
$soon_due_date = date("Y-m-d H:i:s", strtotime($dateTarget . " +" . $row ['value'] . " month"));
}
if ($row ['method_detail'] == "hour") {
$soon_due_date = date("Y-m-d H:i:s", strtotime($dateTarget . " -" . $row ['value'] . " hour"));
}
if ($row ['method_detail'] == "SKIP") {
$soon_due_date = "SKIP";
}
} else {
// empty settings, so use default of one month
$soon_due_date = date("Y-m-d H:i:s", strtotime($dateTarget . " +2 week"));
}
// Return the array of three dates
return array($soon_due_date,$dateTarget,$past_due_date);
}
/**
* Adds an action into the reminder array
*
* @param array $reminderOldArray Contains the current array of reminders
* @param array $reminderNew Array of a new reminder
* @return array Reminders
*/
function reminder_results_integrate($reminderOldArray, $reminderNew)
{
$results = array();
// If reminderArray is empty, then insert new reminder
if (empty($reminderOldArray)) {
$results[] = $reminderNew;
return $results;
}
// If duplicate reminder, then replace the old one
$duplicate = false;
foreach ($reminderOldArray as $reminderOld) {
if (
$reminderOld['pid'] == $reminderNew['pid'] &&
$reminderOld['category'] == $reminderNew['category'] &&
$reminderOld['item'] == $reminderNew['item']
) {
$results[] = $reminderNew;
$duplicate = true;
} else {
$results[] = $reminderOld;
}
}
// If a new reminder, then insert the new reminder
if (!$duplicate) {
$results[] = $reminderNew;
}
return $results;
}
/**
* Compares number of items with requested comparison operator
*
* @param string $comp Comparison operator(eq,ne,gt,ge,lt,le)
* @param string $thres Threshold used in comparison
* @param integer $num_items Number of items
* @return boolean Comparison results
*/
function itemsNumberCompare($comp, $thres, $num_items)
{
if (($comp == "eq") && ($num_items == $thres)) {
return true;
} elseif (($comp == "ne") && ($num_items != $thres) && ($num_items > 0)) {
return true;
} elseif (($comp == "gt") && ($num_items > $thres)) {
return true;
} elseif (($comp == "ge") && ($num_items >= $thres)) {
return true;
} elseif (($comp == "lt") && ($num_items < $thres) && ($num_items > 0)) {
return true;
} elseif (($comp == "le") && ($num_items <= $thres) && ($num_items > 0)) {
return true;
} else {
return false;
}
}
/**
* Converts a text comparison operator to sql equivalent
*
* @param string $comp Comparison operator(eq,ne,gt,ge,lt,le)
* @return string contains sql compatible comparison operator
*/
function convertCompSql($comp)
{
if ($comp == "eq") {
return "=";
} elseif ($comp == "ne") {
return "!=";
} elseif ($comp == "gt") {
return ">";
} elseif ($comp == "ge") {
return ">=";
} elseif ($comp == "lt") {
return "<";
} else { // ($comp == "le")
return "<=";
}
}
/**
* Function to find age in years (with decimal) on the target date
*
* @param string $dob date of birth
* @param string $target date to calculate age on
* @return float years(decimal) from dob to target(date)
*/
function convertDobtoAgeYearDecimal($dob, $target)
{
$ageInfo = parseAgeInfo($dob, $target);
return $ageInfo['age'];
}
/**
* Function to find age in months (with decimal) on the target date
*
* @param string $dob date of birth
* @param string $target date to calculate age on
* @return float months(decimal) from dob to target(date)
*/
function convertDobtoAgeMonthDecimal($dob, $target)
{
$ageInfo = parseAgeInfo($dob, $target);
return $ageInfo['age_in_months'];
}
/**
* Function to calculate the percentage for reports.
*
* @param integer $pass_filter number of patients that pass filter
* @param integer $exclude_filter number of patients that are excluded
* @param integer $pass_target number of patients that pass target
* @return string Number formatted into a percentage
*/
function calculate_percentage($pass_filt, $exclude_filt, $pass_targ)
{
if ($pass_filt > 0) {
$perc = number_format(($pass_targ / ($pass_filt - $exclude_filt)) * 100, 4) . xl('%');
} else {
$perc = "0" . xl('%');
}
return $perc;
}